RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 HDAC3O15379 428 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 LEFTY1O75610 366 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 KCNK5O95279 499 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 S100A5P33763 92 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PREPP48147 710 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CLDN10P78369 228 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 LRRC66Q68CR7 880 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC30A9Q6PML9 568 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PLEKHM3Q6ZWE6 761 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 GLYATL1Q969I3 302 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TMEM120AQ9BXJ8 343 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 XKRYO14609 159 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC28A2O43868 658 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SELENOVP59797 346 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 FOXD4Q12950 439 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SEMA3AQ14563 771 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CBARPQ8N350 705 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TCP10LQ8TDR4 215 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 ERP27Q96DN0 273 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CMKLR1Q99788 373 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 EVA1AQ9H8M9 152 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 IL1RL2Q9HB29 575 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 AP1M2Q9Y6Q5 423 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 A0A1B0GW55 424 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 A0A1W2PP55 124 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 MYL12AP19105 171 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 BGNP21810 368 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 CDC42P60953 191 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 CHIT1Q13231 466 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 CES3Q6UWW8 571 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PIM3Q86V86 326 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 OSBPL10Q9BXB5 764 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 IL1RAPQ9NPH3 570 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DKK3Q9UBP4 350 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 LRP5O75197 1615 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 RFXANKO14593 260 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PTGESO14684 152 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 SNRPB2P08579 225 aaKnown RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 KIR3DL1P43629 444 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PRKAG1P54619 331 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ITGA1P56199 1179 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 GBE1Q04446 702 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DSC1Q08554 894 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 DECR1Q16698 335 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ZYG11AQ6WRX3 759 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 RTL4Q6ZR62 310 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 GATAD2AQ86YP4 633 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ZDHHC1Q8WTX9 485 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 C14orf105Q9NVL8 296 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 CXorf51AA0A1B0GTR3 108 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC22A2O15244 555 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 BCAT2O15382 392 aaPredicted RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 TMEM31Q5JXX7 168 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 SYPL2Q5VXT5 272 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ATG14Q6ZNE5 492 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 EIF3MQ7L2H7 374 aaKnown RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PIWIL2Q8TC59 973 aaKnown RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ERLEC1Q96DZ1 483 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 IP6K3Q96PC2 410 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PANX1Q96RD7 426 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 GPRC5BQ9NZH0 403 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 WASH4PA8MWX3 477 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PROM1O43490 865 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 TBX18O95935 607 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ALDOAP04075 364 aaKnown RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PIRTP0C851 137 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 LRRC23Q53EV4 343 aaPredicted RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 GCNT6Q5T4J0 391 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 LCN1P1Q5VSP4 162 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ZCCHC12Q6PEW1 402 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PRELID2Q8N945 189 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 OR4K17Q8NGC6 315 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 OR56A1Q8NGH5 318 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 ZNF473Q8WTR7 871 aaKnown RBP13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 CPT1BQ92523 772 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 PPP1R14AQ96A00 147 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 Q9N2J8 555 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 TMEM184CQ9NVA4 438 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 B4GALT6Q9UBX8 382 aa13.18□□□□□ -0.3
PRPF38A-201ENST00000257181 SLX4Q8IY92 1834 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 FAM86C2PA6NEL3 165 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms