RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 SPATS1Q496A3 300 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 MTX3Q5HYI7 312 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 REM2Q8IYK8 340 aaPredicted RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 TAGAPQ8N103 731 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 CARNMT1Q8N4J0 409 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 EEF1AKMT1Q8WVE0 214 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 MYRFLQ96LU7 910 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 NUSAP1Q9BXS6 441 aaKnown RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 BRINP2Q9C0B6 783 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 OPTCQ9UBM4 332 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 FRYQ5TBA9 3013 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 TTC36A6NLP5 189 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 H7C0S8 307 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 INPP4BO15327 924 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 ECI2O75521 394 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 OTCP00480 354 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 CXCL10P02778 98 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 VARSP26640 1264 aaKnown RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 GKP32189 559 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 DOC2BQ14184 412 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 EID3Q8N140 333 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 DCBLD1Q8N8Z6 715 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 MCOLN3Q8TDD5 553 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 CDK15Q96Q40 435 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 GULP1Q9UBP9 304 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 SUCOQ9UBS9 1254 aaKnown RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 PCDHGC4Q9Y5F7 938 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 GOLGA4Q13439 2230 aaKnown RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 TRBV5-3A0A0A0MS03 114 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 SLC38A8A6NNN8 435 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 NIPSNAP2O75323 286 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 EPOP01588 193 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 COL6A1P12109 1028 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 SERPINA4P29622 427 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 RHDQ02161 417 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 TRAP1Q12931 704 aaKnown RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 IKBKEQ14164 716 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 RCAN2Q14206 197 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 CYP51A1Q16850 503 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 PFKFB4Q16877 469 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 ZDHHC20Q5W0Z9 365 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 LPCAT2Q7L5N7 544 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 TBC1D21Q8IYX1 336 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 PARP8Q8N3A8 854 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 TMEM132CQ8N3T6 1108 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 SVOPQ8N4V2 548 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 DDHD1Q8NEL9 900 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 BRSK1Q8TDC3 778 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 DGCR14Q96DF8 476 aaKnown RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 FEM1CQ96JP0 617 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 ZCCHC2Q9C0B9 1178 aaKnown RBP9.03□□□□□ -0.96
RPA1-201ENST00000254719 RAD21L1Q9H4I0 556 aa9.03□□□□□ -0.96
RPA1-201ENST00000254719 TPST1O60507 370 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 CYP2A6P11509 494 aaPredicted RBP9.02□□□□□ -0.96
RPA1-201ENST00000254719 TXNL4AP83876 142 aaKnown RBP9.02□□□□□ -0.96
RPA1-201ENST00000254719 TRIM25Q14258 630 aaKnown RBP9.02□□□□□ -0.96
RPA1-201ENST00000254719 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 GPRIN3Q6ZVF9 776 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 SPRED2Q7Z698 418 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 ADHFE1Q8IWW8 467 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 ADGRG5Q8IZF4 528 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 HJURPQ8NCD3 748 aaPredicted RBP9.02□□□□□ -0.96
RPA1-201ENST00000254719 ATL1Q8WXF7 558 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 SH3KBP1Q96B97 665 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 REPS1Q96D71 796 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 COQ10BQ9H8M1 238 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 INTS10Q9NVR2 710 aaKnown RBP9.02□□□□□ -0.96
RPA1-201ENST00000254719 SLC25A37Q9NYZ2 338 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 RIMKLBQ9ULI2 386 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 HCFC2Q9Y5Z7 792 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 CEPT1Q9Y6K0 416 aa9.02□□□□□ -0.96
RPA1-201ENST00000254719 YY2O15391 372 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 KDELR3O43731 214 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 CKMP06732 381 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 ANXA5P08758 320 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 SLC2A4P14672 509 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 CKMT2P17540 419 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 PPP3CCP48454 512 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 CBX2Q14781 532 aaPredicted RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 TSNQ15631 228 aaKnown RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 IQCCQ4KMZ1 466 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 LINGO4Q6UY18 593 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 ADCK1Q86TW2 530 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 ZDHHC13Q8IUH4 622 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 CMTR2Q8IYT2 770 aaKnown RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 PAPD5Q8NDF8 572 aaKnown RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 DIS3LQ8TF46 1054 aaKnown RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 KIAA1191Q96A73 305 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 EPB41L1Q9H4G0 881 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 AGPAT4Q9NRZ5 378 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 FARSBQ9NSD9 589 aaKnown RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 INTS7Q9NVH2 962 aaKnown RBP9.02□□□□□ -0.97
RPA1-201ENST00000254719 TMEM161AQ9NX61 479 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 FMO4P31512 558 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 MAPK9P45984 424 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 ACADVLP49748 655 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 MESP2Q0VG99 397 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 SLC14A1Q13336 389 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 VPS26BQ4G0F5 336 aa9.02□□□□□ -0.97
RPA1-201ENST00000254719 RABL3Q5HYI8 236 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms