RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PEX2P28328 305 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 GNALP38405 381 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 MNDAP41218 407 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 AP1S1P61966 158 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 GRSF1Q12849 480 aaKnown RBP eCLIP18.41■□□□□ 0.543e-7■■■□□ 16.2
SMARCC1-201ENST00000254480 SULT1C3Q6IMI6 304 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 C11orf24Q96F05 449 aaPredicted RBP18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 LCA5LO95447 670 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 MTHFD1P11586 935 aaKnown RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 HNRNPDQ14103 355 aaKnown RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 FZD8Q9H461 694 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 A8MU76 341 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 FADS2P1A8MWK0 482 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 THRBP10828 461 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 UNGP13051 313 aaPredicted RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 IL12BP29460 328 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 DGKEP52429 567 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 PAQR3Q6TCH7 311 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 PIM3Q86V86 326 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 IQCHQ86VS3 1027 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 EOMESO95936 686 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 GDI1P31150 447 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 GATMP50440 423 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.4■□□□□ 0.542e-7■■■■■ 75
SMARCC1-201ENST00000254480 GIPC3Q8TF64 312 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 C7orf26Q96N11 449 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 TBC1D17Q9HA65 648 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 CARS2Q9HA77 564 aaKnown RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 NEUROD4Q9HD90 331 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 MRPS30Q9NP92 439 aaKnown RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 DHRS7Q9Y394 339 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 CFIP05156 583 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 CPN2P22792 545 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 GGT5P36269 586 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 ACTR1BP42025 376 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 GPD2P43304 727 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 ACTR1AP61163 376 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 OGFOD2Q6N063 350 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 LRRC17Q8N6Y2 441 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 C11orf65Q8NCR3 313 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 RIOK2Q9BVS4 552 aaKnown RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 ADAP2Q9NPF8 381 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 ANGPTL1O95841 491 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 CRELD2Q6UXH1 353 aaPredicted RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 CHERPQ8IWX8 916 aaKnown RBP18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 AP3S1Q92572 193 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 PCDHAC1Q9H158 963 aa18.4■□□□□ 0.54
SMARCC1-201ENST00000254480 PRKAR1AP10644 381 aa18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 RPS27LQ71UM5 84 aaKnown RBP18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 PGAM4Q8N0Y7 254 aa18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 GPR151Q8TDV0 419 aa18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 NAT14Q8WUY8 206 aa18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 DENND2DQ9H6A0 471 aaPredicted RBP18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 PNO1Q9NRX1 252 aaKnown RBP18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 SLC2A6Q9UGQ3 507 aa18.39■□□□□ 0.54
SMARCC1-201ENST00000254480 RGS10O43665 173 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 MFSD5Q6N075 450 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 FOXR2Q6PJQ5 311 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 RBM4BQ9BQ04 359 aaKnown RBP18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 KCNS3Q9BQ31 491 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 RBM4Q9BWF3 364 aaKnown RBP18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 ATRNL1Q5VV63 1379 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 PRODHO43272 600 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 NME6O75414 186 aaPredicted RBP18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 IL7RP16871 459 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 Q6ZVU0 165 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 CCDC28BQ9BUN5 200 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 KCNA5P22460 613 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 STARP49675 285 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 ARHGAP1Q07960 439 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 PDE12Q6L8Q7 609 aaKnown RBP18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 PEX5LQ8IYB4 626 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 HPS1Q92902 700 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 TTYH3Q9C0H2 523 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 DSN1Q9H410 356 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 ST6GALNAC4Q9H4F1 302 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 GRHL1Q9NZI5 618 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 DYTNA2CJ06 578 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 DDX6P26196 483 aaKnown RBP eCLIP18.39■□□□□ 0.535e-10■■■□□ 15
SMARCC1-201ENST00000254480 NSG1P42857 185 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 LRP10Q7Z4F1 713 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 THAP5Q7Z6K1 395 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 IFNL1Q8IU54 200 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 COX18Q8N8Q8 333 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 C7orf57Q8NEG2 295 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 NUS1Q96E22 293 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 MALT1Q9UDY8 824 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 BCL9LQ86UU0 1499 aa18.39■□□□□ 0.53
SMARCC1-201ENST00000254480 IGKV6D-41A0A0C4DH26 115 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 CPED1A4D0V7 1026 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 PTGER3P43115 390 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 NFATC2Q13469 925 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 NPLOC4Q8TAT6 608 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 KBTBD7Q8WVZ9 684 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 DNAAF2Q9NVR5 837 aaKnown RBP18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 H3BSH0 61 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 ITM2AO43736 263 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 ARCN1P48444 511 aaKnown RBP18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 GPM6BQ13491 265 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 LYSMD3Q7Z3D4 306 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms