RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZNF490Q9ULM2 529 aaPredicted RBP11.77□□□□□ -0.53
USHBP1-201ENST00000252597 ABT1Q9ULW3 272 aaKnown RBP11.77□□□□□ -0.53
USHBP1-201ENST00000252597 CAB39Q9Y376 341 aaPredicted RBP11.77□□□□□ -0.53
USHBP1-201ENST00000252597 FAM234BA2RU67 622 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 F5H5T6 163 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MFN2O95140 757 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MLYCDO95822 493 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ALPLP05186 524 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 LCKP06239 509 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MMP2P08253 660 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 HOXD12P35452 270 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MASP1P48740 699 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 POLD2P49005 469 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 HK3P52790 923 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ZNF846Q147U1 533 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 UPP1Q16831 310 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 CTXN3Q4LDR2 81 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 SOWAHCQ53LP3 525 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 RAB41Q5JT25 222 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ATXN7L2Q5T6C5 722 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 FAM171A1Q5VUB5 890 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 CES5AQ6NT32 575 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 SPATA19Q7Z5L4 167 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 TMEM179BQ7Z7N9 219 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 P3H2Q8IVL5 708 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 UBE2J2Q8N2K1 259 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 CHDHQ8NE62 594 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 RSPH1Q8WYR4 309 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ZNF599Q96NL3 588 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 TFB2MQ9H5Q4 396 aaKnown RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 SCHIP1Q9P0W5 487 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 CPQQ9Y646 472 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 TRIP12Q14669 1992 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 FAM155AB1AL88 458 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ATXN1LP0C7T5 689 aaKnown RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 EPHA2P29317 976 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 OXCT1P55809 520 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 DMC1Q14565 340 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 HACD2Q6Y1H2 254 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 VTCN1Q7Z7D3 282 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 PROSER1Q86XN7 944 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 PHYKPLQ8IUZ5 450 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MCFD2Q8NI22 146 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ARRDC2Q8TBH0 407 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ASB2Q96Q27 587 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 DPH2Q9BQC3 489 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MAF1Q9H063 256 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 FAM124BQ9H5Z6 455 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 SIAEQ9HAT2 523 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 TBCCD1Q9NVR7 557 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 PDP1Q9P0J1 537 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 PCTPQ9UKL6 214 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ZNF99A8MXY4 864 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 SLC1A7O00341 560 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 ULK1O75385 1050 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 OXSR1O95747 527 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 C1QCP02747 245 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 DNTTP04053 509 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 RHOQP17081 205 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 EEFSECP57772 596 aaKnown RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 MRPS6P82932 125 aaKnown RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 CBLBQ13191 982 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 GTF2H2Q13888 395 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 GTF2H2CQ6P1K8 395 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 P2RY8Q86VZ1 359 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 GATAD2AQ86YP4 633 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 NETO1Q8TDF5 533 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 FLRT1Q9NZU1 646 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 GNPTGQ9UJJ9 305 aa11.76□□□□□ -0.53
USHBP1-201ENST00000252597 SAMHD1Q9Y3Z3 626 aaKnown RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 GPC6Q9Y625 555 aaPredicted RBP11.76□□□□□ -0.53
USHBP1-201ENST00000252597 LOC285556D6RIA3 1793 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 PFDN6O15212 129 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 FGF1P05230 155 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 CYP2C18P33260 490 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ADARB1P78563 741 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 EMX1Q04741 257 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 HSPA14Q0VDF9 509 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 DUSP4Q13115 394 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 DGUOKQ16854 277 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 NIPAL1Q6NVV3 410 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 CADM3Q8N126 398 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 IRGQQ8WZA9 623 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 REXO5Q96IC2 774 aaKnown RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 APOLD1Q96LR9 279 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ALOXE3Q9BYJ1 711 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 SMOC2Q9H3U7 446 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 MAGEE1Q9HCI5 957 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 UBA2Q9UBT2 640 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 ANK1P16157 1881 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 TCRBV5S2A0A599 114 aa11.75□□□□□ -0.53
USHBP1-201ENST00000252597 TFECO14948 347 aaPredicted RBP11.75□□□□□ -0.53
USHBP1-201ENST00000252597 PER2O15055 1255 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms