RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CCSER2Q9H7U1 834 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 EVA1BQ9NVM1 165 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 RAB26Q9ULW5 256 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 RUVBL1Q9Y265 456 aaKnown RBP11.34□□□□□ -0.59
NOD1-201ENST00000222823 YIPF1Q9Y548 306 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 LTBP3Q9NS15 1303 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 K7EPI3 171 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 TNFRSF11BO00300 401 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 CSKP41240 450 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 IRF9Q00978 393 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 HEPACAMQ14CZ8 416 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 LRRC73Q5JTD7 316 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SLC9A4Q6AI14 798 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 FAM180AQ6UWF9 173 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 CHST15Q7LFX5 561 aaPredicted RBP11.34□□□□□ -0.59
NOD1-201ENST00000222823 SNX20Q7Z614 316 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SCAIQ8N9R8 606 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SLC22A17Q8WUG5 538 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 RACGAP1Q9H0H5 632 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 TPK1Q9H3S4 243 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 OXSMQ9NWU1 459 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 DMTF1Q9Y222 760 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 RWDD3Q9Y3V2 267 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 FAM86C2PA6NEL3 165 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 FAM159BA6NKW6 160 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 ARVCFO00192 962 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 HCRTO43612 131 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SIX3O95343 332 aaPredicted RBP11.34□□□□□ -0.59
NOD1-201ENST00000222823 PCCBP05166 539 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 IMPDH1P20839 514 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 CAPGP40121 348 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 PNLIPRP1P54315 467 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 MOGSQ13724 837 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SPRED3Q2MJR0 410 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 PITRM1Q5JRX3 1037 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 UBXN11Q5T124 520 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 OSTM1Q86WC4 334 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 S100ZQ8WXG8 99 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 C1GALT1C1Q96EU7 318 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 CYP2S1Q96SQ9 504 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 NPY6RQ99463 290 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SUV39H2Q9H5I1 410 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 SESN1Q9Y6P5 492 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 LTBP4Q8N2S1 1624 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 ZNF831Q5JPB2 1677 aa11.34□□□□□ -0.59
NOD1-201ENST00000222823 BCKDKO14874 412 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 OR1F1O43749 312 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 TULP3O75386 442 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ANGPTL1O95841 491 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 OAS1P00973 400 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 FABP3P05413 133 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 PSMD4P55036 377 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 GSCP56915 257 aaPredicted RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 RGS8P57771 180 aaPredicted RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 RHAGQ02094 409 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SRSF11Q05519 484 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 OR52J3Q8NH60 311 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 LCN9Q8WX39 176 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 MTERF1Q99551 399 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 EBPLQ9BY08 206 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 WNK3Q9BYP7 1800 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 FNIP2Q9P278 1114 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.33□□□□□ -0.6
NOD1-201ENST00000222823 ABHD14A-ACY1A0A1B0GW23 586 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 J3KR12 359 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ERN1O75460 977 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 IFNGP01579 166 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ACRP10323 421 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SLC26A3P40879 764 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 KCNQ1P51787 676 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 LIN52Q52LA3 116 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SNAP47Q5SQN1 464 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ZNF730Q6ZMV8 503 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 RTL4Q6ZR62 310 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 CXXC5Q7LFL8 322 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 MCFD2Q8NI22 146 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 EEF1AKMT1Q8WVE0 214 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 LRTOMTQ8WZ04 291 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SUCOQ9UBS9 1254 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 SRRDQ9UH36 339 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 WASF2Q9Y6W5 498 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 IGKV6-21A0A0C4DH24 114 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 FADS2P1A8MWK0 482 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 MAGEB17A8MXT2 336 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 RASGRP1O95267 797 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 NCK1P16333 377 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 EFNA1P20827 205 aaPredicted RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 MYL9P24844 172 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 HERVK_113P63132 956 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 BLMHQ13867 455 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 LARS2Q15031 903 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 SLC9B1Q4ZJI4 515 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ACSBG2Q5FVE4 666 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 TXNDC8Q6A555 127 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 DENND5AQ6IQ26 1287 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ZNF514Q96K75 400 aaPredicted RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 PEBP4Q96S96 227 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SMOQ99835 787 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms