RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 MPIP34949 423 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 SCNN1AP37088 669 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 TEAD2Q15562 447 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 SMU1Q2TAY7 513 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 EIPR1Q53HC9 387 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 TMEM63BQ5T3F8 832 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 MBOAT1Q6ZNC8 495 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 POF1BQ8WVV4 589 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 PNO1Q9NRX1 252 aaKnown RBP18.64■□□□□ 0.58
SMPD3-201ENST00000219334 PEX12O00623 359 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF823P16415 610 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 RIPK1Q13546 671 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 CA9Q16790 459 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 Q6ZVU0 165 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF461Q8TAF7 563 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 C7orf26Q96N11 449 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 BCO2Q9BYV7 579 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 DSN1Q9H410 356 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 INSL5Q9Y5Q6 135 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 OAS3Q9Y6K5 1087 aaKnown RBP18.64■□□□□ 0.57
SMPD3-201ENST00000219334 TP73O15350 636 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 SLC7A1P30825 629 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 ARHGDIBP52566 201 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 KCT2Q8NC54 265 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 COQ4Q9Y3A0 265 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 ADGRB2O60241 1585 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 K7EPI3 171 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 ADAMDEC1O15204 470 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 REM1O75628 298 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 CHRNA1P02708 482 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 AHCYP23526 432 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 IGFBP5P24593 272 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 VIPR1P32241 457 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 GPR17Q13304 367 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 NARS2Q96I59 477 aaKnown RBP18.64■□□□□ 0.57
SMPD3-201ENST00000219334 TXNRD2Q9NNW7 524 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 C8orf4Q9NR00 106 aa18.64■□□□□ 0.57
SMPD3-201ENST00000219334 CCDC162PA2VCL2 907 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 SCELO95171 688 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CSTF2P33240 577 aaKnown RBP eCLIP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 FAUP35544 74 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 RPS14P62263 151 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 LIPEQ05469 1076 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 NUDT13Q86X67 352 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 GKN2Q86XP6 184 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CAMKVQ8NCB2 501 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 C8orf48Q96LL4 319 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 NDC1Q9BTX1 674 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 EFCAB11Q9BUY7 163 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 SMURF2Q9HAU4 748 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A9O60656 530 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A6P19224 532 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A1P22309 533 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A4P22310 534 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A3P35503 534 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 PTDSS1P48651 473 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 TAS2R39P59534 338 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 PPP2R2BQ00005 443 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 ANKRD46Q86W74 232 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF433Q8N7K0 673 aaPredicted RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 C1QTNF1Q9BXJ1 281 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A7Q9HAW7 530 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A10Q9HAW8 530 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 UGT1A8Q9HAW9 530 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 FANCFQ9NPI8 374 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 SERINC1Q9NRX5 453 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 DZANK1Q9NVP4 752 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 FNIP2Q9P278 1114 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CCDC182A6NF36 153 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CHRNB2P17787 502 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CLCNKAP51800 687 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 PLGLB1Q02325 96 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 RBBP4Q09028 425 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 QPRTQ15274 297 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF311Q5JNZ3 666 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 TCEAL6Q6IPX3 200 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 FRRS1Q6ZNA5 592 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 YTHDF3Q7Z739 585 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CMTM8Q8IZV2 173 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF366Q8N895 744 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 OR2T34Q8NGX1 318 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 OR2T3Q8NH03 318 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 TBL1XR1Q9BZK7 514 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 IFT80Q9P2H3 777 aaPredicted RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 RPL26L1Q9UNX3 145 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 DUXAA6NLW8 204 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CHRNA4P43681 627 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 MTX3Q5HYI7 312 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 GALNT5Q7Z7M9 940 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 RASGEF1AQ8N9B8 481 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 SAMD11Q96NU1 681 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 MTERF1Q99551 399 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 SCML2Q9UQR0 700 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 PRORSD1PA6NEY8 169 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 RNF225M0QZC1 329 aaPredicted RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 B3GNT6Q6ZMB0 384 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 GLB1L3Q8NCI6 653 aaPredicted RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 OR13C4Q8NGS5 318 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms