RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 SRMSQ9H3Y6 488 aa15.29■□□□□ 0.04
NME3-201ENST00000219302 TFB2MQ9H5Q4 396 aaKnown RBP15.29■□□□□ 0.04
NME3-201ENST00000219302 C10orf88Q9H8K7 445 aa15.29■□□□□ 0.04
NME3-201ENST00000219302 FANCEQ9HB96 536 aa15.29■□□□□ 0.04
NME3-201ENST00000219302 SLAMF7Q9NQ25 335 aa15.29■□□□□ 0.04
NME3-201ENST00000219302 SERTAD3Q9UJW9 196 aa15.29■□□□□ 0.04
NME3-201ENST00000219302 DOPEY1Q5JWR5 2465 aa15.29■□□□□ 0.04
NME3-201ENST00000219302 PIKFYVEQ9Y2I7 2098 aa15.29■□□□□ 0.04
NME3-201ENST00000219302 BTN3A1O00481 513 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 KLF7O75840 302 aaPredicted RBP15.28■□□□□ 0.04
NME3-201ENST00000219302 ANXA9O76027 345 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.047e-7■■■■□ 23.2
NME3-201ENST00000219302 VARSP26640 1264 aaKnown RBP15.28■□□□□ 0.04
NME3-201ENST00000219302 RBL1P28749 1068 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 LMAN1P49257 510 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 GEMP55040 296 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 HADHBP55084 474 aaKnown RBP15.28■□□□□ 0.04
NME3-201ENST00000219302 OLIG2Q13516 323 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 ATP1A4Q13733 1029 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 KRT33BQ14525 404 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 NCF4Q15080 339 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 PLEKHN1Q494U1 663 aaPredicted RBP15.28■□□□□ 0.04
NME3-201ENST00000219302 KATNAL2Q8IYT4 538 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 PHC3Q8NDX5 983 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 OR13C4Q8NGS5 318 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 C19orf60Q96EN9 201 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 C19orf43Q9BQ61 176 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 GBA3Q9H227 469 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 OR52A5Q9H2C5 316 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 GOLPH3Q9H4A6 298 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 CASS4Q9NQ75 786 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 GPR83Q9NYM4 423 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 C5AR2Q9P296 337 aa15.28■□□□□ 0.04
NME3-201ENST00000219302 CENPEQ02224 2701 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 CCDC66A2RUB6 948 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 GSAPA4D1B5 854 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 H3BMH7 237 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 ZNF749O43361 778 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 TPM3P06753 285 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 ATP1B2P14415 290 aaPredicted RBP15.27■□□□□ 0.04
NME3-201ENST00000219302 PVRP15151 417 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 CYP2A7P20853 494 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 CD151P48509 253 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 RRADP55042 308 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 DENND5AQ6IQ26 1287 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 CDHR3Q6ZTQ4 885 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 BBS12Q6ZW61 710 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 ADGRF3Q8IZF5 1079 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 NXPE1Q8N323 547 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 OR52E1Q8NGJ3 308 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 PRR7Q8TB68 274 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 SNRNP40Q96DI7 357 aaKnown RBP15.27■□□□□ 0.04
NME3-201ENST00000219302 DCUN1D1Q96GG9 259 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 COPS8Q99627 209 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 DPH2Q9BQC3 489 aaPredicted RBP15.27■□□□□ 0.04
NME3-201ENST00000219302 APOL2Q9BQE5 337 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 KLHL25Q9H0H3 589 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 FAM96AQ9H5X1 160 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 COG4Q9H9E3 785 aa15.27■□□□□ 0.04
NME3-201ENST00000219302 POLEQ07864 2286 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 IGLV3-16A0A075B6K0 115 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 A1L4Q6 167 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 E7EQ34 232 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 KRT86O43790 486 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 MFAP3LO75121 409 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 CBX6O95503 412 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 RALBP11234 206 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 PDHA2P29803 388 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 HADHAP40939 763 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 GABRA4P48169 554 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 MARCKSL1P49006 195 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 ZNF140P52738 457 aaPredicted RBP15.26■□□□□ 0.03
NME3-201ENST00000219302 SNX20Q7Z614 316 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 AMIGO1Q86WK6 493 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 VSTM4Q8IW00 320 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 HEXDCQ8WVB3 486 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 ULK4Q96C45 1275 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 TCTN2Q96GX1 697 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 DHRS4Q9BTZ2 278 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 HEMGNQ9BXL5 484 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 MVB12BQ9H7P6 319 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 FAM60AQ9NP50 221 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 CRLS1Q9UJA2 301 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 G3BP2Q9UN86 482 aaKnown RBP15.26■□□□□ 0.03
NME3-201ENST00000219302 FER1L5A0AVI2 2057 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 CCDC88CQ9P219 2028 aa15.26■□□□□ 0.03
NME3-201ENST00000219302 TRBV5-4A0A0C4DH59 114 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 H7C0C1 242 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 APOC4-APOC2K7ER74 178 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 HCRTR1O43613 425 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 CRTAMO95727 393 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 APOC2P02655 101 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 HBQ1P09105 142 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 AGXTP21549 392 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 ATP5OP48047 213 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 CDKN1CP49918 316 aaPredicted RBP15.25■□□□□ 0.03
NME3-201ENST00000219302 TMPRSS15P98073 1019 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 RAPSNQ13702 412 aa15.25■□□□□ 0.03
NME3-201ENST00000219302 BOP1Q14137 746 aaKnown RBP15.25■□□□□ 0.03
NME3-201ENST00000219302 SSPNQ14714 243 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms