RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 KLHL36Q8N4N3 616 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 DRAXINQ8NBI3 349 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 LPGAT1Q92604 370 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 OSTF1Q92882 214 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 GPR22Q99680 433 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 BCO2Q9BYV7 579 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PDZD7Q9H5P4 517 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PRDM5Q9NQX1 630 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 FLRT1Q9NZU1 646 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ERVW-1Q9UQF0 538 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 GRIP1Q9Y3R0 1128 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SSC5DA1L4H1 1573 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FAM25EA8MYX2 175 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PLSCR1O15162 318 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 DNAJB6O75190 326 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PSIP1O75475 530 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 EPCAMP16422 314 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 NRIP1P48552 1158 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 RHDQ02161 417 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 GALNT1Q10472 559 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 ATP6AP1Q15904 470 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PLEKHG4Q58EX7 1191 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ACSBG2Q5FVE4 666 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FAM91A1Q658Y4 838 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CLHC1Q8NHS4 586 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PLEKHO2Q8TD55 490 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF558Q96NG5 402 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CEP41Q9BYV8 373 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 TM9SF3Q9HD45 589 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PCDH12Q9NPG4 1184 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 NR2E1Q9Y466 385 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PAPPAQ13219 1627 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 IGLV3-22A0A075B6J6 115 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 IFNA6P05013 189 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 HOXD8P13378 290 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 RPL4P36578 427 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 CRADDP78560 199 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CTBP1Q13363 440 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 LPCAT4Q643R3 524 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF367Q7RTV3 350 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 RBM12BQ8IXT5 1001 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 TIGD4Q8IY51 512 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 ATAD1Q8NBU5 361 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 RHEBL1Q8TAI7 183 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ADAM32Q8TC27 787 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 TTPALQ9BTX7 342 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 LGR4Q9BXB1 951 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CIPCQ9C0C6 399 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 RC3H2Q9HBD1 1191 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 TRIM39Q9HCM9 518 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF358Q9NW07 568 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SPATA7Q9P0W8 599 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PCDH10Q9P2E7 1040 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FBXL21Q9UKT6 434 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 KCNU1A8MYU2 1149 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 HLA-DQA2P01906 255 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 CD2P06729 351 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 DCKP27707 260 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 THOP1P52888 689 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SUZ12Q15022 739 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 SWI5Q1ZZU3 235 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZDHHC21Q8IVQ6 265 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 RAVER1Q8IY67 606 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 GLIS3Q8NEA6 775 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OR4C6Q8NH72 309 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 AHCYL2Q96HN2 611 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 C12orf42Q96LP6 360 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZNF570Q96NI8 536 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 AARSD1Q9BTE6 412 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 GSDMCQ9BYG8 508 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TRIM36Q9NQ86 728 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGB5Q9Y5G0 923 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 A0A0U1RQJ8 604 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 MCIDASD6RGH6 385 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 H0YGN5 161 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TBL1XO60907 577 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 PRAMEF12O95522 483 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 POP4O95707 220 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 PRKAR2AP13861 404 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 STOMP27105 288 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SMSP52788 366 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SRP54P61011 504 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 RHAGQ02094 409 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 INCA1Q0VD86 236 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 HSPA14Q0VDF9 509 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SLC14A2Q15849 920 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 MBLAC2Q68D91 279 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 RAET1GQ6H3X3 334 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OR2T5Q6IEZ7 315 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZNF527Q8NB42 609 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OR2T29Q8NH02 315 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OVCA2Q8WZ82 227 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 PPP1R14AQ96A00 147 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 CXorf40BQ96DE9 158 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 DNAJC1Q96KC8 554 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 MIPEPQ99797 713 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SLC30A2Q9BRI3 323 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 CCDC32Q9BV29 185 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 RERGLQ9H628 205 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms