RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TMEM9BQ9NQ34 198 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 WASH6PQ9NQA3 447 aa26.63■■□□□ 1.85
CHMP4B-201ENST00000217402 MAP2K7O14733 419 aa26.62■■□□□ 1.85
CHMP4B-201ENST00000217402 PYGBP11216 843 aa26.62■■□□□ 1.85
CHMP4B-201ENST00000217402 LVRNQ6Q4G3 990 aa26.62■■□□□ 1.85
CHMP4B-201ENST00000217402 NAGSQ8N159 534 aa26.62■■□□□ 1.85
CHMP4B-201ENST00000217402 KCTD4Q8WVF5 259 aa26.62■■□□□ 1.85
CHMP4B-201ENST00000217402 NLGN3Q9NZ94 848 aa26.62■■□□□ 1.85
CHMP4B-201ENST00000217402 CABIN1Q9Y6J0 2220 aa26.62■■□□□ 1.85
CHMP4B-201ENST00000217402 EIF3FO00303 357 aaPredicted RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 TOP3BO95985 862 aaKnown RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 ZNF883P0CG24 379 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 ACADLP28330 430 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 RPE65Q16518 533 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 CAPRIN2Q6IMN6 1127 aaKnown RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 IYDQ6PHW0 289 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 TRABD2AQ86V40 505 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 SRRM1Q8IYB3 904 aaKnown RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 UBXN10Q96LJ8 280 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 ZFHX2Q9C0A1 2572 aaPredicted RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 EP300Q09472 2414 aaPredicted RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 ALPPL2P10696 532 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 DLG1Q12959 904 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 C6orf132Q5T0Z8 1188 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 LRRC8EQ6NSJ5 796 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 CYHR1Q6ZMK1 362 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 NEK10Q6ZWH5 1172 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 CENPLQ8N0S6 344 aaPredicted RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 C4orf33Q8N1A6 199 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 EID2Q8N6I1 236 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 SLC37A2Q8TED4 501 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 TFGQ92734 400 aaPredicted RBP26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 ASF1AQ9Y294 204 aa26.61■■□□□ 1.85
CHMP4B-201ENST00000217402 TRIM38O00635 465 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 GDF9O60383 454 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 MPC1LP0DKB6 136 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 SLC2A4P14672 509 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 CCDC91Q7Z6B0 441 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 KYQ8NBH2 561 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 OR4C6Q8NH72 309 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 NXNL1Q96CM4 212 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 PGM2Q96G03 612 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 CABS1Q96KC9 395 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 FOPNLQ96NB1 174 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 IGSF5Q9NSI5 407 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 ZNF624Q9P2J8 865 aaPredicted RBP26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 IKZF3Q9UKT9 509 aa26.6■■□□□ 1.85
CHMP4B-201ENST00000217402 NPEPPSL1A6NEC2 478 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 BTN3A1O00481 513 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 LTA4HP09960 611 aaKnown RBP26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 MTHFD1P11586 935 aaKnown RBP26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 KRT4P19013 534 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 MAZP56270 477 aaKnown RBP26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 SUZ12Q15022 739 aaKnown RBP26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 PLD6Q8N2A8 252 aaKnown RBP26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 SFRP1Q8N474 314 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 PHC3Q8NDX5 983 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 ACMSDQ8TDX5 336 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 CXorf40BQ96DE9 158 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 PDLIM5Q96HC4 596 aaKnown RBP26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 DUSP23Q9BVJ7 150 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 DERL2Q9GZP9 239 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 TMBIM4Q9HC24 238 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 BTBD3Q9Y2F9 522 aa26.59■■□□□ 1.85
CHMP4B-201ENST00000217402 ARHGEF17Q96PE2 2063 aaPredicted RBP26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 KIR2DS5A0A0G2JLQ3 304 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 PRAMEF33A0A0G2JMD5 474 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 A0A0G2JNG1 304 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 KIR2DS3K7RE56 304 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 NOBOXO60393 691 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 MATN4O95460 622 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 CD1DP15813 335 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 KIR2DS5Q14953 304 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 TRIM48Q8IWZ4 208 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 OR5AR1Q8NGP9 310 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 MAPK15Q8TD08 544 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 ZNF358Q9NW07 568 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 ADAMTS6Q9UKP5 1117 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 PCDHGB2Q9Y5G2 931 aa26.58■■□□□ 1.85
CHMP4B-201ENST00000217402 OR5K4A6NMS3 321 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 C4orf47A7E2U8 309 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 CDC7O00311 574 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 SIGLEC6O43699 453 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 ZBTB14O43829 449 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC26A3P40879 764 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC19A1P41440 591 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 BDKRB1P46663 353 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 GLRBP48167 497 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 KRT33BQ14525 404 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 FAM83EQ2M2I3 478 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 ZCCHC8Q6NZY4 707 aaKnown RBP26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 ARL10Q8N8L6 244 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 FERD3LQ96RJ6 166 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 FOXD2O60548 495 aaPredicted RBP26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 KLHL2O95198 593 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 MYF5P13349 255 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 CCNFP41002 786 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 OGFOD3Q6PK18 319 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 UNC5DQ6UXZ4 953 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms