RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 GPATCH11Q8N954 259 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 MFSD2AQ8NA29 543 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 DCUN1D1Q96GG9 259 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 COX14Q96I36 57 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CCNL2Q96S94 520 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 NDNQ99608 321 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ORAI3Q9BRQ5 295 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 MCMBPQ9BTE3 642 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 BOCQ9BWV1 1114 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 TEX101Q9BY14 249 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ZCCHC2Q9C0B9 1178 aaKnown RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 EBF2Q9HAK2 575 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 PHPT1Q9NRX4 125 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 STARD5Q9NSY2 213 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 EURLQ9NYK6 297 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 LGALS13Q9UHV8 139 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 GNPTGQ9UJJ9 305 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CORO1CQ9ULV4 474 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CRYL1Q9Y2S2 319 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 OAS3Q9Y6K5 1087 aaKnown RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 USP9YO00507 2555 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 UTP20O75691 2785 aaKnown RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ANKRD17O75179 2603 aaKnown RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 DOCK9Q9BZ29 2069 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 FAM95CA0A1B0GW59 222 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 TRIM49D1C9J1S8 452 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 PRAMEF26H0Y7S4 382 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 CACNB4O00305 520 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 PRMT5O14744 637 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 RGS16O15492 202 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 SIGLEC6O43699 453 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 OPA1O60313 960 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 KRT38O76015 456 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 GP1BAP07359 652 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 RALBP11234 206 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 MYCLP1P12525 358 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 CNTFP26441 200 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 FMO4P31512 558 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 NSG1P42857 185 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 KIAA1024LP59773 190 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 CTSL3PQ5NE16 218 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 LGSNQ5TDP6 509 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 MROH9Q5TGP6 573 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 HECTD2Q5U5R9 776 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 ZNF549Q6P9A3 640 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 KYAT3Q6YP21 454 aaKnown RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 USP53Q70EK8 1073 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 DET1Q7L5Y6 550 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 TMEM145Q8NBT3 493 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 MZB1Q8WU39 189 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 NAT14Q8WUY8 206 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 HEXDCQ8WVB3 486 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 FUBP1Q96AE4 644 aaKnown RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 MTBPQ96DY7 904 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 ELMO2Q96JJ3 720 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 GPR22Q99680 433 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 AARSD1Q9BTE6 412 aaKnown RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 CLPBQ9H078 707 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 OR2AG1Q9H205 316 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 P2RY12Q9H244 342 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 CCDC68Q9H2F9 335 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 CENPHQ9H3R5 247 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 ASCL3Q9NQ33 180 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 MTO1Q9Y2Z2 717 aaKnown RBP9.24□□□□□ -0.93
PHGDH-228ENST00000641847 PRSS21Q9Y6M0 314 aa9.24□□□□□ -0.93
PHGDH-228ENST00000641847 A0A1W2PR77 199 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 HMX2A2RU54 273 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 POM121BA6NF01 834 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 A6NNZ2 444 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 TPP1O14773 563 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 NIPSNAP2O75323 286 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 AP2A2O94973 939 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ASMTLO95671 621 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ESR1P03372 595 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 WNT1P04628 370 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SNRPAP09012 282 aaKnown RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ATP1B2P14415 290 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 PKMP14618 531 aaKnown RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 KRT15P19012 456 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SAT1P21673 171 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 RPS3P23396 243 aaKnown RBP eCLIP9.23□□□□□ -0.932e-18■■■■□ 20.9
PHGDH-228ENST00000641847 TRIM23P36406 574 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 MLLT3P42568 568 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 SERPINB8P50452 374 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ADARP55265 1226 aaKnown RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 PFN3P60673 137 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 TLE1Q04724 770 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ILF2Q12905 390 aaKnown RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 GTF2H3Q13889 308 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 PDE1CQ14123 709 aaPredicted RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 NFATC4Q14934 902 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 C3orf38Q5JPI3 329 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 CDCP2Q5VXM1 449 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 PTRHD1Q6GMV3 140 aaKnown RBP9.23□□□□□ -0.93
PHGDH-228ENST00000641847 FAM45BPQ6NSW5 357 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ABI3BPQ7Z7G0 1075 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 ADGRG6Q86SQ4 1221 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 IQCHQ86VS3 1027 aa9.23□□□□□ -0.93
PHGDH-228ENST00000641847 CNPY4Q8N129 248 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms