RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 EBLN1P0CF75 366 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 ACADMP11310 421 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SRFP11831 508 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 EPB42P16452 691 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 NUDT1P36639 197 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 ACADVLP49748 655 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 CCNG1P51959 295 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 HK3P52790 923 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SH3BP2P78314 561 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SEMG2Q02383 582 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 BTKQ06187 659 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 MAD2L1Q13257 205 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SGCGQ13326 291 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 GTF2H2Q13888 395 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 BOP1Q14137 746 aaKnown RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 LSM12Q3MHD2 195 aaKnown RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 GGTA1PQ4G0N0 100 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SLC9B1Q4ZJI4 515 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 C6orf163Q5TEZ5 329 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 OGFOD2Q6N063 350 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 GTF2H2CQ6P1K8 395 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 PNCKQ6P2M8 343 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 TMEM220Q6QAJ8 160 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 UNC5DQ6UXZ4 953 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 LPCAT2Q7L5N7 544 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SLC22A15Q8IZD6 547 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 FAM9CQ8IZT9 166 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 TEX9Q8N6V9 391 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 RASGEF1AQ8N9B8 481 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 IL17RCQ8NAC3 791 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 TRPC4APQ8TEL6 797 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 GANCQ8TET4 914 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 TSPEARQ8WU66 669 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 TWIST2Q8WVJ9 160 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 SKA2Q8WVK7 121 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 ATP6V1E2Q96A05 226 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 MCUR1Q96AQ8 359 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 FBXL8Q96CD0 374 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 CCDC138Q96M89 665 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 ACOX2Q99424 681 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 RTKNQ9BST9 563 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 FBXL12Q9NXK8 326 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 CNOT6Q9ULM6 557 aaKnown RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 ITM2BQ9Y287 266 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 MRPS17Q9Y2R5 130 aaKnown RBP9.53□□□□□ -0.88
PHGDH-215ENST00000641371 BPTFQ12830 3046 aa9.53□□□□□ -0.88
PHGDH-215ENST00000641371 F5P12259 2224 aa9.52□□□□□ -0.88
PHGDH-215ENST00000641371 NUMA1Q14980 2115 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 DYTNA2CJ06 578 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 MGAT4DA6NG13 374 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 NCF1BA6NI72 391 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-215ENST00000641371 NCF1CA8MVU1 366 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-215ENST00000641371 PRR5-ARHGAP8B1AHC4 643 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 E9PBE3 544 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 H3BM21 787 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 UBDO15205 165 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 KMOO15229 486 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 SGTAO43765 313 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 KLHL41O60662 606 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 CBX6O95503 412 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 KLF8O95600 359 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-215ENST00000641371 SOD1P00441 154 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 EGFP01133 1207 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 T-ENOLP0DO92 83 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 NCF1P14598 390 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-215ENST00000641371 IDO1P14902 403 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 LBPP18428 481 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 KELP23276 732 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 EPHA3P29320 983 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 HMOX2P30519 316 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 CA5AP35218 305 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 TRIM23P36406 574 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 HSD17B2P37059 387 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 SOX9P48436 509 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 CDH13P55290 713 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 ARHGAP8P85298 464 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 PRKCQQ04759 706 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 KLF10Q13118 480 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 STX5Q13190 355 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 RIPK1Q13546 671 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 LRRC32Q14392 662 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 NAA25Q14CX7 972 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 PON2Q15165 354 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 SMAD2Q15796 467 aaKnown RBP9.52□□□□□ -0.89
PHGDH-215ENST00000641371 ATG14Q6ZNE5 492 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 DET1Q7L5Y6 550 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 GOLGA7Q7Z5G4 137 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 MILR1Q7Z6M3 343 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 ADGRG6Q86SQ4 1221 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 LRRTM4Q86VH4 590 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 HORMAD1Q86X24 394 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 GALNT13Q8IUC8 556 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 TRAPPC5Q8IUR0 188 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 C10orf67Q8IYJ2 551 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 PELI3Q8N2H9 469 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 OXR1Q8N573 874 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 AADATQ8N5Z0 425 aa9.52□□□□□ -0.89
PHGDH-215ENST00000641371 BEND7Q8N7W2 519 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-215ENST00000641371 OR2L2Q8NH16 312 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms