RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PPP1CAP62136 330 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 TRADDQ15628 312 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 ST3GAL2Q16842 350 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 MRNIPQ6NTE8 343 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 PROSER1Q86XN7 944 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 CILP2Q8IUL8 1156 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 WDR36Q8NI36 951 aaKnown RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 GRAMD1AQ96CP6 724 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 TRIM44Q96DX7 344 aaPredicted RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 ERP44Q9BS26 406 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 ASCL3Q9NQ33 180 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 C20orf96Q9NUD7 363 aaPredicted RBP21.26■□□□□ 0.99
SCN1B-206ENST00000638536 KLHL3Q9UH77 587 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 CDYLQ9Y232 598 aa21.26■□□□□ 0.99
SCN1B-206ENST00000638536 QSOX1O00391 747 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 PAMP19021 973 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 FMO4P31512 558 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 PPARGP37231 505 aaPredicted RBP21.25■□□□□ 0.99
SCN1B-206ENST00000638536 ETV5P41161 510 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 CRYMQ14894 314 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 ZNF470Q6ECI4 717 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 WDR74Q6RFH5 385 aaPredicted RBP21.25■□□□□ 0.99
SCN1B-206ENST00000638536 ZMYND15Q9H091 742 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 PDP2Q9P2J9 529 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 LOXL2Q9Y4K0 774 aa21.25■□□□□ 0.99
SCN1B-206ENST00000638536 SNRNP200O75643 2136 aaKnown RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 FAM187AA6NFU0 413 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 LIN7AO14910 233 aaPredicted RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 PLD2O14939 933 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 S1PR4O95977 384 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 CCL4P13236 92 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 PGAM1P18669 254 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 ACADLP28330 430 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 ELK3P41970 407 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 LEPRP48357 1165 aaKnown RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 RPA4Q13156 261 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 FASTKD3Q14CZ7 662 aaKnown RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 CLPPQ16740 277 aaPredicted RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 LONRF1Q17RB8 773 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 HSP90AA5PQ58FG0 334 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 DUPD1Q68J44 220 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 SDCCAG8Q86SQ7 713 aaPredicted RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 RBM12BQ8IXT5 1001 aaKnown RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 FBXO39Q8N4B4 442 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 FAM136AQ96C01 138 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 SLC46A1Q96NT5 459 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 CARD6Q9BX69 1037 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 STRADBQ9C0K7 418 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 FBXO6Q9NRD1 293 aaPredicted RBP21.24■□□□□ 0.99
SCN1B-206ENST00000638536 GALPQ9UBC7 116 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 SLC24A2Q9UI40 661 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 CHMP2BQ9UQN3 213 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 RAXQ9Y2V3 346 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 TEX264Q9Y6I9 313 aa21.24■□□□□ 0.99
SCN1B-206ENST00000638536 TMEM8BA6NDV4 472 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 GSTM1P09488 218 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 AMD1P17707 334 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 OGNP20774 298 aaKnown RBP21.23■□□□□ 0.99
SCN1B-206ENST00000638536 RPS3P23396 243 aaKnown RBP eCLIP21.23■□□□□ 0.99
SCN1B-206ENST00000638536 SLC1A2P43004 574 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 GSTM4Q03013 218 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 HSPA14Q0VDF9 509 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 PTRHD1Q6GMV3 140 aaKnown RBP21.23■□□□□ 0.99
SCN1B-206ENST00000638536 MAATS1Q7Z4T9 603 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 PDZD3Q86UT5 571 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 PDIK1LQ8N165 341 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 TFGQ92734 400 aaPredicted RBP21.23■□□□□ 0.99
SCN1B-206ENST00000638536 FERD3LQ96RJ6 166 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 KIR3DX1Q9H7L2 352 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 GRHL1Q9NZI5 618 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 PCDHGA8Q9Y5G5 932 aa21.23■□□□□ 0.99
SCN1B-206ENST00000638536 TMX2-CTNND1H3BSU7 103 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 CAPN5O15484 640 aaPredicted RBP21.22■□□□□ 0.99
SCN1B-206ENST00000638536 KIF1CO43896 1103 aaKnown RBP21.22■□□□□ 0.99
SCN1B-206ENST00000638536 NIPSNAP2O75323 286 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 GPC4O75487 556 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 TNFSF15O95150 251 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 ERVK-10P10266 1014 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 AOAHP28039 575 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 PRKG2Q13237 762 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 THOC5Q13769 683 aaKnown RBP21.22■□□□□ 0.99
SCN1B-206ENST00000638536 HIF1AQ16665 826 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 DNAJC21Q5F1R6 531 aaKnown RBP21.22■□□□□ 0.99
SCN1B-206ENST00000638536 ARHGAP22Q7Z5H3 698 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 ANKMY2Q8IV38 441 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 OR5AR1Q8NGP9 310 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 TCF12Q99081 682 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 SLC17A6Q9P2U8 582 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 GNPTGQ9UJJ9 305 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 SPTBP11277 2137 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 LOC400499M0QZD8 3231 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 IFRD1O00458 451 aaPredicted RBP21.22■□□□□ 0.99
SCN1B-206ENST00000638536 DXOO77932 396 aaKnown RBP21.22■□□□□ 0.99
SCN1B-206ENST00000638536 CAPZBP47756 277 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 CD151P48509 253 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 MPP1Q00013 466 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 SLC7A5Q01650 507 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 PLCL1Q15111 1095 aa21.22■□□□□ 0.99
SCN1B-206ENST00000638536 TBC1D25Q3MII6 688 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms