RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MAGEA9P43362 315 aa15.05■□□□□ -0
CLN6-219ENST00000637329 ID4P47928 161 aa15.05■□□□□ -0
CLN6-219ENST00000637329 AP1S2P56377 157 aa15.05■□□□□ -0
CLN6-219ENST00000637329 OVGP1Q12889 678 aa15.05■□□□□ -0
CLN6-219ENST00000637329 RPA4Q13156 261 aa15.05■□□□□ -0
CLN6-219ENST00000637329 PFKFB4Q16877 469 aa15.05■□□□□ -0
CLN6-219ENST00000637329 TTC23LQ6PF05 361 aa15.05■□□□□ -0
CLN6-219ENST00000637329 FAM124AQ86V42 546 aa15.05■□□□□ -0
CLN6-219ENST00000637329 LRRTM4Q86VH4 590 aa15.05■□□□□ -0
CLN6-219ENST00000637329 SPNS2Q8IVW8 549 aa15.05■□□□□ -0
CLN6-219ENST00000637329 SLC22A15Q8IZD6 547 aa15.05■□□□□ -0
CLN6-219ENST00000637329 TCAIMQ8N3R3 496 aa15.05■□□□□ -0
CLN6-219ENST00000637329 SPEM1Q8N4L4 309 aa15.05■□□□□ -0
CLN6-219ENST00000637329 AFAP1L2Q8N4X5 818 aa15.05■□□□□ -0
CLN6-219ENST00000637329 CCNYL1Q8N7R7 359 aa15.05■□□□□ -0
CLN6-219ENST00000637329 BEND7Q8N7W2 519 aaPredicted RBP15.05■□□□□ -0
CLN6-219ENST00000637329 OR2L2Q8NH16 312 aa15.05■□□□□ -0
CLN6-219ENST00000637329 ASB11Q8WXH4 323 aa15.05■□□□□ -0
CLN6-219ENST00000637329 CLDN23Q96B33 292 aa15.05■□□□□ -0
CLN6-219ENST00000637329 SLC12A9Q9BXP2 914 aa15.05■□□□□ -0
CLN6-219ENST00000637329 ILKAPQ9H0C8 392 aaPredicted RBP15.05■□□□□ -0
CLN6-219ENST00000637329 GSTO2Q9H4Y5 243 aa15.05■□□□□ -0
CLN6-219ENST00000637329 FAM86C1Q9NVL1 165 aa15.05■□□□□ -0
CLN6-219ENST00000637329 STK38LQ9Y2H1 464 aa15.05■□□□□ -0
CLN6-219ENST00000637329 ATXN2Q99700 1313 aaKnown RBP15.05■□□□□ -0
CLN6-219ENST00000637329 MYO10Q9HD67 2058 aa15.05■□□□□ -0
CLN6-219ENST00000637329 MGAT4DA6NG13 374 aa15.04■□□□□ -0
CLN6-219ENST00000637329 GFYI3L273 518 aa15.04■□□□□ -0
CLN6-219ENST00000637329 CACNB4O00305 520 aaPredicted RBP15.04■□□□□ -0
CLN6-219ENST00000637329 MATN4O95460 622 aa15.04■□□□□ -0
CLN6-219ENST00000637329 APBB3O95704 486 aa15.04■□□□□ -0
CLN6-219ENST00000637329 CYP2A7P20853 494 aa15.04■□□□□ -0
CLN6-219ENST00000637329 NUBP1P53384 320 aa15.04■□□□□ -0
CLN6-219ENST00000637329 GAS6Q14393 721 aa15.04■□□□□ -0
CLN6-219ENST00000637329 ARL13AQ5H913 290 aaPredicted RBP15.04■□□□□ -0
CLN6-219ENST00000637329 SULT1C3Q6IMI6 304 aa15.04■□□□□ -0
CLN6-219ENST00000637329 ANO7Q6IWH7 933 aa15.04■□□□□ -0
CLN6-219ENST00000637329 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
CLN6-219ENST00000637329 C11orf96Q7Z7L8 435 aa15.04■□□□□ -0
CLN6-219ENST00000637329 ZNF547Q8IVP9 402 aa15.04■□□□□ -0
CLN6-219ENST00000637329 PGBD3Q8N328 593 aa15.04■□□□□ -0
CLN6-219ENST00000637329 FLCNQ8NFG4 579 aa15.04■□□□□ -0
CLN6-219ENST00000637329 FOXJ1Q92949 421 aa15.04■□□□□ -0
CLN6-219ENST00000637329 FAR2Q96K12 515 aa15.04■□□□□ -0
CLN6-219ENST00000637329 TRIM54Q9BYV2 358 aa15.04■□□□□ -0
CLN6-219ENST00000637329 FOXQ1Q9C009 403 aa15.04■□□□□ -0
CLN6-219ENST00000637329 WWP1Q9H0M0 922 aa15.04■□□□□ -0
CLN6-219ENST00000637329 PCED1AQ9H1Q7 454 aa15.04■□□□□ -0
CLN6-219ENST00000637329 DPEP2Q9H4A9 486 aa15.04■□□□□ -0
CLN6-219ENST00000637329 COG4Q9H9E3 785 aa15.04■□□□□ -0
CLN6-219ENST00000637329 VTI1BQ9UEU0 232 aa15.04■□□□□ -0
CLN6-219ENST00000637329 EBF1Q9UH73 591 aa15.04■□□□□ -0
CLN6-219ENST00000637329 DMTF1Q9Y222 760 aa15.04■□□□□ -0
CLN6-219ENST00000637329 SLC17A4Q9Y2C5 497 aa15.04■□□□□ -0
CLN6-219ENST00000637329 PIKFYVEQ9Y2I7 2098 aa15.04■□□□□ -0
CLN6-219ENST00000637329 SPTBN4Q9H254 2564 aa15.03■□□□□ -0
CLN6-219ENST00000637329 TMEM202A6NGA9 273 aa15.03■□□□□ -0
CLN6-219ENST00000637329 FPGTO14772 594 aa15.03■□□□□ -0
CLN6-219ENST00000637329 KMOO15229 486 aa15.03■□□□□ -0
CLN6-219ENST00000637329 KCNJ13O60928 360 aa15.03■□□□□ -0
CLN6-219ENST00000637329 PSIP1O75475 530 aaKnown RBP15.03■□□□□ -0
CLN6-219ENST00000637329 DCTN3O75935 186 aa15.03■□□□□ -0
CLN6-219ENST00000637329 SUPT7LO94864 414 aa15.03■□□□□ -0
CLN6-219ENST00000637329 KELP23276 732 aa15.03■□□□□ -0
CLN6-219ENST00000637329 EEF1DP29692 281 aaKnown RBP15.03■□□□□ -0
CLN6-219ENST00000637329 AKT2P31751 481 aa15.03■□□□□ -0
CLN6-219ENST00000637329 HNMTP50135 292 aa15.03■□□□□ -0
CLN6-219ENST00000637329 HK3P52790 923 aa15.03■□□□□ -0
CLN6-219ENST00000637329 DMPKQ09013 629 aa15.03■□□□□ -0
CLN6-219ENST00000637329 LCP2Q13094 533 aa15.03■□□□□ -0
CLN6-219ENST00000637329 PCBP2Q15366 365 aaKnown RBP eCLIP15.03■□□□□ -0
CLN6-219ENST00000637329 UNC50Q53HI1 259 aa15.03■□□□□ -0
CLN6-219ENST00000637329 ANKS6Q68DC2 871 aa15.03■□□□□ -0
CLN6-219ENST00000637329 UBE2R2Q712K3 238 aaPredicted RBP15.03■□□□□ -0
CLN6-219ENST00000637329 VRK3Q8IV63 474 aa15.03■□□□□ -0
CLN6-219ENST00000637329 HOMEZQ8IX15 550 aa15.03■□□□□ -0
CLN6-219ENST00000637329 LSMEM2Q8N112 164 aa15.03■□□□□ -0
CLN6-219ENST00000637329 CAMKK1Q8N5S9 505 aa15.03■□□□□ -0
CLN6-219ENST00000637329 ZNF781Q8N8C0 355 aa15.03■□□□□ -0
CLN6-219ENST00000637329 FBXO15Q8NCQ5 510 aaPredicted RBP15.03■□□□□ -0
CLN6-219ENST00000637329 RFWD2Q8NHY2 731 aa15.03■□□□□ -0
CLN6-219ENST00000637329 ZNF483Q8TF39 744 aaPredicted RBP15.03■□□□□ -0
CLN6-219ENST00000637329 FOPNLQ96NB1 174 aa15.03■□□□□ -0
CLN6-219ENST00000637329 TIMM29Q9BSF4 260 aa15.03■□□□□ -0
CLN6-219ENST00000637329 APOOQ9BUR5 198 aa15.03■□□□□ -0
CLN6-219ENST00000637329 ZNF395Q9H8N7 513 aaPredicted RBP15.03■□□□□ -0
CLN6-219ENST00000637329 PARVBQ9HBI1 364 aa15.03■□□□□ -0
CLN6-219ENST00000637329 CD93Q9NPY3 652 aa15.03■□□□□ -0
CLN6-219ENST00000637329 DNAJC28Q9NX36 388 aa15.03■□□□□ -0
CLN6-219ENST00000637329 PCTPQ9UKL6 214 aa15.03■□□□□ -0
CLN6-219ENST00000637329 ADAMTS6Q9UKP5 1117 aa15.03■□□□□ -0
CLN6-219ENST00000637329 OR1A2Q9Y585 309 aa15.03■□□□□ -0
CLN6-219ENST00000637329 TRPM6Q9BX84 2022 aa15.03■□□□□ -0
CLN6-219ENST00000637329 A0A0G2JND7 137 aa15.02■□□□□ -0
CLN6-219ENST00000637329 H3BM21 787 aa15.02■□□□□ -0
CLN6-219ENST00000637329 MLYCDO95822 493 aa15.02■□□□□ -0
CLN6-219ENST00000637329 CATP04040 527 aaKnown RBP15.02■□□□□ -0
CLN6-219ENST00000637329 CHRNGP07510 517 aa15.02■□□□□ -0
CLN6-219ENST00000637329 ANXA5P08758 320 aa15.02■□□□□ -0
CLN6-219ENST00000637329 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms