RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 AMZ2Q86W34 360 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 GKN2Q86XP6 184 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 TRAPPC5Q8IUR0 188 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 DENND6AQ8IWF6 608 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 RBM12BQ8IXT5 1001 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 GSPT2Q8IYD1 628 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 PELI3Q8N2H9 469 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 PPM1NQ8N819 430 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 GPBAR1Q8TDU6 330 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ACMSDQ8TDX5 336 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ASZ1Q8WWH4 475 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 TMEM159Q96B96 161 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 PDXPQ96GD0 296 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 RUFY1Q96T51 708 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 MYOCQ99972 504 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 TRIM56Q9BRZ2 755 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 LGR4Q9BXB1 951 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 OR2AG1Q9H205 316 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 STN1Q9H668 368 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A7Q9HAW7 530 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A10Q9HAW8 530 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A8Q9HAW9 530 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 SYTL2Q9HCH5 934 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 FGF22Q9HCT0 170 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 LGALS13Q9UHV8 139 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ACSL5Q9ULC5 683 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 INVSQ9Y283 1065 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 FNDC3AQ9Y2H6 1198 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 HEBP2Q9Y5Z4 205 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 R4GN57 208 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ARHGEF17Q96PE2 2063 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 ADAMTS9Q9P2N4 1935 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 UQCRHLA0A096LP55 91 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 FAM95CA0A1B0GW59 222 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 GOLGA6L10A6NI86 522 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 LMO7DNF2Z398 122 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CDK2AP1O14519 115 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 DYNC1I1O14576 645 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 RASGRF2O14827 1237 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 FLRT2O43155 660 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 GPR39O43194 453 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 EFSO43281 561 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 SGTAO43765 313 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 GPC4O75487 556 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 PIAS2O75928 621 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CFIP05156 583 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 UQCRHP07919 91 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 ITGA2BP08514 1039 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 SNRPAP09012 282 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 MYZAPP0CAP1 466 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 MPC1LP0DKB6 136 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 COL6A2P12110 1019 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 STMN1P16949 149 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF37AP17032 561 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 IDSP22304 550 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 FDXRP22570 491 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 DGKAP23743 735 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 MAOBP27338 520 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 EPHA8P29322 1005 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CRABP2P29373 138 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 HALP42357 657 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 MAGEA12P43365 314 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CSNK1EP49674 416 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 ARHGAP8P85298 464 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 GRIK2Q13002 908 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 EIF2B5Q13144 721 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 SP140Q13342 867 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CTBP1Q13363 440 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 TSNAXIP1Q2TAA8 658 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF658BQ4V348 819 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 SYTL3Q4VX76 610 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 KHDC1Q4VXA5 237 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 TAF1BQ53T94 588 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 HP1BP3Q5SSJ5 553 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 TMEM220Q6QAJ8 160 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 UNC5DQ6UXZ4 953 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 TIFABQ6ZNK6 161 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CAPN12Q6ZSI9 719 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 OTOAQ7RTW8 1153 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 HDXQ7Z353 690 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 SPATS2Q86XZ4 545 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 IQCKQ8N0W5 287 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 NKAPQ8N5F7 415 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 RASGEF1AQ8N9B8 481 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 FBXO15Q8NCQ5 510 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 OR6C4Q8NGE1 309 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 DCAKDQ8WVC6 231 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 ZFPM2Q8WW38 1151 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 OR1E3Q8WZA6 343 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 ALKBH8Q96BT7 664 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 PDLIM5Q96HC4 596 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 MDFIQ99750 246 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 HINFPQ9BQA5 517 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 LRRC61Q9BV99 259 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 BOCQ9BWV1 1114 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CARS2Q9HA77 564 aaKnown RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 CYP4F12Q9HCS2 524 aa6.59□□□□□ -1.35
UPF3B-205ENST00000636792 FBXO6Q9NRD1 293 aaPredicted RBP6.59□□□□□ -1.35
UPF3B-205ENST00000636792 TMEM74BQ9NUR3 256 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms