RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PEX11BO96011 259 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 CTSLP07711 333 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 GKP32189 559 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 RPS14P62263 151 aaKnown RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 SLC10A7Q0GE19 358 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 TMED1Q13445 227 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 SPIDRQ14159 915 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 FASTKQ14296 549 aaKnown RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 POM121L1PQ3SYA9 428 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 REP15Q6BDI9 236 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 C8orf82Q6P1X6 216 aaPredicted RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 PRMT9Q6P2P2 845 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 KLHL35Q6PF15 583 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 FAM160A2Q8N612 972 aaPredicted RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 PCDH20Q8N6Y1 951 aaKnown RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 GABPB2Q8TAK5 448 aaPredicted RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 GRIN3AQ8TCU5 1115 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 SIPA1Q96FS4 1042 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 TEKT5Q96M29 485 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 RANBP9Q96S59 729 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 TCF12Q99081 682 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 MLPHQ9BV36 600 aaPredicted RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 CEP44Q9C0F1 390 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 RHBDL2Q9NX52 303 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 ZSCAN32Q9NX65 697 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 CACNA1HO95180 2353 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 CXorf51AA0A1B0GTR3 108 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 AQP12BA6NM10 295 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 GJB3O75712 270 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 AHSGP02765 367 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 TCN1P20061 433 aaPredicted RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 NMBRP28336 390 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 CD68P34810 354 aaPredicted RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 NME5P56597 212 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 RHOAP61586 193 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 POU4F1Q01851 419 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 INO80DQ53TQ3 878 aaPredicted RBP15.25■□□□□ 0.03
CLN8-209ENST00000635970 PAOXQ6QHF9 649 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 Q6ZNX1 250 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 WDR5BQ86VZ2 330 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 DHFR2Q86XF0 187 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 AQP12AQ8IXF9 295 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 SMYD1Q8NB12 490 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 ZBTB44Q8NCP5 570 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 ACVR1CQ8NER5 493 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 SLCO4A1Q96BD0 722 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 VPS50Q96JG6 964 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 TRMOQ9BU70 441 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 LHX3Q9UBR4 397 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 NUMA1Q14980 2115 aa15.25■□□□□ 0.03
CLN8-209ENST00000635970 MYOCOSA0A1B0GUC4 107 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 MUSKO15146 869 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 MID1O15344 667 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 PHGDHO43175 533 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 GPC4O75487 556 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 SRP72O76094 671 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 HNRNPCP07910 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLN8-209ENST00000635970 PAMP19021 973 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 MYF6P23409 242 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 RGRP47804 291 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 ILF2Q12905 390 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 CARD16Q5EG05 197 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 ZNF776Q68DI1 518 aaPredicted RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 GK5Q6ZS86 529 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 ERMP1Q7Z2K6 904 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 CCNYL1Q8N7R7 359 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 PCYOX1LQ8NBM8 494 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 OR2AP1Q8NGE2 309 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 OR2T34Q8NGX1 318 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 HOPXQ9BPY8 73 aaPredicted RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 YTHDF1Q9BYJ9 559 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 CYP8B1Q9UNU6 501 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 PRORSD1PA6NEY8 169 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 NRP2O60462 931 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 JUNP05412 331 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 HMOX2P30519 316 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 GLRBP48167 497 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 PTPN5P54829 565 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 MPP1Q00013 466 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 SMAD1Q15797 465 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 CST6Q15828 149 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 FAM83EQ2M2I3 478 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 MAP7D1Q3KQU3 841 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 MTX3Q5HYI7 312 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 KIAA0408Q6ZU52 694 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 GPR180Q86V85 440 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 SLC22A9Q8IVM8 553 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 MYO1HQ8N1T3 1032 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 RYBPQ8N488 228 aaPredicted RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 OR8D1Q8WZ84 308 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 VOPP1Q96AW1 172 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 ISG20Q96AZ6 181 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 CNDP2Q96KP4 475 aaKnown RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 TSGA13Q96PP4 275 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 CINPQ9BW66 212 aaPredicted RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 FAM126AQ9BYI3 521 aaPredicted RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 SEMA6AQ9H2E6 1030 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 ZDHHC6Q9H6R6 413 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 CCM2LQ9NUG4 571 aaPredicted RBP15.24■□□□□ 0.03
CLN8-209ENST00000635970 HECAQ9UBI9 543 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms