RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 DDX10Q13206 875 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 OLIG2Q13516 323 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 GTF2H2Q13888 395 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CRYMQ14894 314 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PNLIPRP3Q17RR3 467 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ALG11Q2TAA5 492 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 USP41Q3LFD5 358 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PPP6R3Q5H9R7 873 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SIRPB2Q5JXA9 342 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 STXBP5Q5T5C0 1151 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM72AQ5TYM5 149 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 GKAP1Q5VSY0 366 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 EEF1A1P5Q5VTE0 462 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM69BQ5VUD6 431 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 OR7E24Q6IFN5 339 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM72DQ6L9T8 149 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 GTF2H2CQ6P1K8 395 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM171BQ6P995 826 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 KLHL35Q6PF15 583 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RAD9BQ6WBX8 426 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PQLC2Q6ZP29 291 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 IKBIPQ70UQ0 350 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MTSS1LQ765P7 747 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CACNA2D4Q7Z3S7 1137 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SDCCAG8Q86SQ7 713 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 GTSCR1Q86UQ5 136 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SATL1Q86VE3 508 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM72BQ86X60 149 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 WDR63Q8IWG1 891 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 EMC1Q8N766 993 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PCYOX1LQ8NBM8 494 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MAPK1IP1LQ8NDC0 245 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 C1orf131Q8NDD1 294 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF248Q8NDW4 579 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 OR2AK2Q8NG84 335 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 TDRD7Q8NHU6 1098 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 HM13Q8TCT9 377 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MAGEC3Q8TD91 643 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC38A5Q8WUX1 472 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC44A1Q8WWI5 657 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RFFLQ8WZ73 363 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 APBB2Q92870 758 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SNAPC3Q92966 411 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ARHGEF2Q92974 986 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PIGTQ969N2 578 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 IGSF8Q969P0 613 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF524Q96C55 264 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF501Q96CX3 271 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SAT2Q96F10 170 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RRNAD1Q96FB5 475 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 LINGO1Q96FE5 620 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 STAMBPL1Q96FJ0 436 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 GRAMD2BQ96HH9 432 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 OXNAD1Q96HP4 312 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MPP4Q96JB8 637 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC41A2Q96JW4 573 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PPM1MQ96MI6 270 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CMTM3Q96MX0 182 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 TTC14Q96N46 770 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF599Q96NL3 588 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 GAD1Q99259 594 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PCYT2Q99447 389 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 EGFL8Q99944 293 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM110AQ9BQ89 295 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SDF4Q9BRK5 362 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SYT17Q9BSW7 474 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 AGXT2Q9BYV1 514 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CSTL1Q9H114 145 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SIL1Q9H173 461 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PIGMQ9H3S5 423 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 UNC45AQ9H3U1 944 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PLEKHA4Q9H4M7 779 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 POLR1BQ9H9Y6 1135 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SEBOXQ9HB31 216 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PCDH9Q9HC56 1237 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 TRPC7Q9HCX4 862 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 HAUS2Q9NVX0 235 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM118AQ9NWS6 357 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CWC15Q9P013 229 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MARCH4Q9P2E8 410 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 COPG2Q9UBF2 871 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 STK39Q9UEW8 545 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PNMA2Q9UL42 364 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ACSL5Q9ULC5 683 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MTMR6Q9Y217 621 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC45A1Q9Y2W3 748 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 OR2W1Q9Y3N9 320 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 LAS1LQ9Y4W2 734 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ARID2Q68CP9 1835 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PTPRCP08575 1304 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MYO16Q9Y6X6 1858 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 A0A1W2PP64 1363 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 BRD4O60885 1362 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RLFQ13129 1914 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ROCK1Q13464 1354 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MIA3Q5JRA6 1907 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 GREB1LQ9C091 1923 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 NINLQ9Y2I6 1382 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 KDM6AO15550 1401 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 C10orf71Q711Q0 1435 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms