RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 AMZ2Q86W34 360 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 SPNS2Q8IVW8 549 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 CYP4X1Q8N118 509 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 SIDT2Q8NBJ9 832 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 TCEAL3Q969E4 200 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 TSPAN17Q96FV3 270 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 TMEM168Q9H0V1 697 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 SPATS2LQ9NUQ6 558 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 FGFR1OP2Q9NVK5 253 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 GALPQ9UBC7 116 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 SLC23A2Q9UGH3 650 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 APOBEC3BQ9UH17 382 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 TRMT6Q9UJA5 497 aaKnown RBP14.18□□□□□ -0.14
LINC00339-208ENST00000634934 SLC6A14Q9UN76 642 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 MED16Q9Y2X0 877 aa14.18□□□□□ -0.14
LINC00339-208ENST00000634934 MGAT4DA6NG13 374 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 CSF2P04141 144 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 STMN1P16949 149 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 VCLP18206 1134 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 TGM1P22735 817 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 CCR7P32248 378 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 ARHGAP8P85298 464 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 GRIK2Q13002 908 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 ZNF460Q14592 562 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 PDK4Q16654 411 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 UGT3A1Q6NUS8 523 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 RAPH1Q70E73 1250 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 CMC1Q7Z7K0 106 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 CEP97Q8IW35 865 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 CFAP206Q8IYR0 622 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 MTBPQ96DY7 904 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 LINC00615Q96LM1 132 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-208ENST00000634934 TMEM237Q96Q45 408 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 TIMM29Q9BSF4 260 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 NUSAP1Q9BXS6 441 aaKnown RBP14.17□□□□□ -0.14
LINC00339-208ENST00000634934 OSGEPL1Q9H4B0 414 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 MCM8Q9UJA3 840 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 KCNK6Q9Y257 313 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 DNMT3AQ9Y6K1 912 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-208ENST00000634934 PIEZO1Q92508 2521 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 ADAMTS9Q9P2N4 1935 aa14.17□□□□□ -0.14
LINC00339-208ENST00000634934 FOXO6A8MYZ6 492 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 H3BM21 787 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 TPP1O14773 563 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 PHGDHO43175 533 aaKnown RBP14.16□□□□□ -0.14
LINC00339-208ENST00000634934 UBOX5O94941 541 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 ZWINTO95229 277 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 MT-ND3P03897 115 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 APOA4P06727 396 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 GSTM1P09488 218 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 NME1P15531 152 aaKnown RBP14.16□□□□□ -0.14
LINC00339-208ENST00000634934 AOAHP28039 575 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 TYK2P29597 1187 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 SERPINB8P50452 374 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 CLCN7P51798 805 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 CCNG1P51959 295 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 RAB10P61026 200 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 TIAL1Q01085 375 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC00339-208ENST00000634934 CTBSQ01459 385 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 GSTM4Q03013 218 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 HSPA14Q0VDF9 509 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 C1orf61Q13536 156 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 LRP8Q14114 963 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 NFE2L1Q14494 772 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 SF3A2Q15428 464 aaKnown RBP14.16□□□□□ -0.14
LINC00339-208ENST00000634934 PRRT3Q5FWE3 981 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 PLA2G2CQ5R387 149 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 SLC23A3Q6PIS1 610 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 OXR1Q8N573 874 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 ZBTB2Q8N680 514 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 OR2L2Q8NH16 312 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 GIMAP7Q8NHV1 300 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 HM13Q8TCT9 377 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 INPP5DQ92835 1189 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 MYCBPQ99417 103 aaPredicted RBP14.16□□□□□ -0.14
LINC00339-208ENST00000634934 SLC30A3Q99726 388 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 ERVMER34-1Q9H9K5 563 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 CAPN10Q9HC96 672 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 SNX15Q9NRS6 342 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 TXLNGQ9NUQ3 528 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 ABCF3Q9NUQ8 709 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 TRNAU1APQ9NX07 287 aaKnown RBP14.16□□□□□ -0.14
LINC00339-208ENST00000634934 TSR3Q9UJK0 312 aaKnown RBP14.16□□□□□ -0.14
LINC00339-208ENST00000634934 DHRS7Q9Y394 339 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 FAM186AA6NE01 2351 aa14.16□□□□□ -0.14
LINC00339-208ENST00000634934 C17orf113A0A1B0GUU1 675 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 KHNYNO15037 678 aaKnown RBP14.15□□□□□ -0.14
LINC00339-208ENST00000634934 KPNA5O15131 536 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 TYROBPO43914 113 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 ALDOAP04075 364 aaKnown RBP14.15□□□□□ -0.14
LINC00339-208ENST00000634934 AK4P27144 223 aaPredicted RBP14.15□□□□□ -0.14
LINC00339-208ENST00000634934 CRABP2P29373 138 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 PREPP48147 710 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 ARRB1P49407 418 aaPredicted RBP14.15□□□□□ -0.14
LINC00339-208ENST00000634934 HNRNPKP61978 463 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00339-208ENST00000634934 IRX4P78413 519 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 ILF3Q12906 894 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00339-208ENST00000634934 HLA-BQ31612 363 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 TTLL9Q3SXZ7 439 aa14.15□□□□□ -0.14
LINC00339-208ENST00000634934 SLC30A9Q6PML9 568 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms