RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ICA1LQ8NDH6 482 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 NDNFQ8TB73 568 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 FAM81AQ8TBF8 368 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SLC2A14Q8TDB8 520 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TOP1MTQ969P6 601 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ST6GALNAC6Q969X2 333 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PANX1Q96RD7 426 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 AIFM2Q9BRQ8 373 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 KATNB1Q9BVA0 655 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 POTEKPQ9BYX7 375 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 DNTTIP1Q9H147 329 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 OR52A5Q9H2C5 316 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 FZD8Q9H461 694 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SYNPO2LQ9H987 977 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CNOT10Q9H9A5 744 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 NEK6Q9HC98 313 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SMARCAL1Q9NZC9 954 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 HAO1Q9UJM8 370 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 FBXW11Q9UKB1 542 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PACSIN2Q9UNF0 486 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 OSGIN2Q9Y236 505 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 USP16Q9Y5T5 823 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 MYBBP1AQ9BQG0 1328 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 TRBV23OR9-2A0A075B6M9 112 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 LOC102723971A0A1B0GUV8 181 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 TCP11X1B4DZS4 312 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 CES2O00748 559 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 PRICKLE3O43900 615 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ECE2O60344 883 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 SEMA3DO95025 777 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 UNC5CO95185 931 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 LCA5LO95447 670 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ITGB3P05106 788 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 HMBSP08397 361 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 CYP2C9P11712 490 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF8P17098 575 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 TPH1P17752 444 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 PTPN1P18031 435 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ATP6V1C1P21283 382 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 BMP8BP34820 402 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 RPS5P46782 204 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 CEBPDP49716 269 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 SUOXP51687 545 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 SLC7A2P52569 658 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 SKP1P63208 163 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 CYP4F2P78329 520 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 GPC5P78333 572 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 EFNB1P98172 346 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 BST1Q10588 318 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 RUNX2Q13950 521 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 PDK3Q15120 406 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ANGPT1Q15389 498 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 TEX44Q53QW1 395 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 TTMPQ5BVD1 217 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 RALGPS1Q5JS13 557 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 LDLRAP1Q5SW96 308 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 WLSQ5T9L3 541 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 MANEALQ5VSG8 457 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 FAM171A1Q5VUB5 890 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 NCR3LG1Q68D85 454 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 CWF19L1Q69YN2 538 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 MRPL14Q6P1L8 145 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 TMEM182Q6ZP80 229 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 NELFCDQ8IXH7 590 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 TAS1R2Q8TE23 839 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 FBLIM1Q8WUP2 373 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 FIG4Q92562 907 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 LPGAT1Q92604 370 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF516Q92618 1163 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 MMABQ96EY8 250 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 OR2A14Q96R47 310 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 CDADC1Q9BWV3 514 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 MS4A7Q9GZW8 240 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 PLK3Q9H4B4 646 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 MTG2Q9H4K7 406 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 RGCCQ9H4X1 137 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 MANSC1Q9H8J5 431 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 MED20Q9H944 212 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 OR6C3Q9NZP0 311 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ENPP5Q9UJA9 477 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 GGA2Q9UJY4 613 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 AMFRQ9UKV5 643 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF510Q9Y2H8 683 aa4.78□□□□□ -1.64
SDCBP-213ENST00000630925 WBP11Q9Y2W2 641 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 BZW2Q9Y6E2 419 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 RPRD2Q5VT52 1461 aaKnown RBP4.78□□□□□ -1.64
SDCBP-213ENST00000630925 ADGRL2O95490 1459 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 E7ENQ6 273 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 GOLGA8RI6L899 631 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 IFNL4K9M1U5 179 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 NR5A2O00482 541 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 TLX3O43711 291 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 CALUO43852 315 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 OPHN1O60890 802 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 CDH16O75309 829 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 TRUB2O95900 331 aaKnown RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 SBK2P0C263 348 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 RAP1GAPP47736 663 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 RPL11P62913 178 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms