RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NR0B2Q15466 257 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 AMZ1Q400G9 498 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 GALNTL6Q49A17 601 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 MINDY4Q4G0A6 757 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 COLEC12Q5KU26 742 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 PHF19Q5T6S3 580 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TRABD2AQ86V40 505 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 PTRH1Q86Y79 214 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 FBXO39Q8N4B4 442 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 EMC1Q8N766 993 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ANKS4BQ8N8V4 417 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RCBTB1Q8NDN9 531 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 WDR36Q8NI36 951 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 JOSD2Q8TAC2 188 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 DENND1AQ8TEH3 1009 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CFAP57Q96MR6 1250 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 KLHL32Q96NJ5 620 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 CCNL2Q96S94 520 aaPredicted RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TBCBQ99426 244 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 ELAC2Q9BQ52 826 aaKnown RBP4.81□□□□□ -1.64
LINC00550-201ENST00000629293 PPCSQ9HAB8 311 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 C1GALT1Q9NS00 363 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 RAD18Q9NS91 495 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 SPASTQ9UBP0 616 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 FETUBQ9UGM5 382 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 PADI4Q9UM07 663 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 HS3ST2Q9Y278 367 aa4.81□□□□□ -1.64
LINC00550-201ENST00000629293 TP53BP1Q12888 1972 aaPredicted RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 SEC16AO15027 2179 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 LY6G6EA0A0G2JKS1 128 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 CAPN8A6NHC0 703 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 C16orf96A6NNT2 1141 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 A8MX80 341 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 TCP11X1B4DZS4 312 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 E7ESA3 106 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ZNF561-AS1K7EIQ3 104 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 OIP5O43482 229 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 CSF2P04141 144 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PRKCGP05129 697 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 VIMP08670 466 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 SSR1P43307 286 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 RABIFP47224 123 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 IL2P60568 153 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PDCD1Q15116 288 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 KAZNQ674X7 775 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ESRP1Q6NXG1 681 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 CYB5D1Q6P9G0 228 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 DCUN1D2Q6PH85 259 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 RGS9BPQ6ZS82 235 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 CYP4V2Q6ZWL3 525 aaPredicted RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 RAB11FIP2Q7L804 512 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 GSTA5Q7RTV2 222 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 TRPM8Q7Z2W7 1104 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PPIL6Q8IXY8 311 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 DCAF4L2Q8NA75 395 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 EDARADDQ8WWZ3 215 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 MED8Q96G25 268 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 MAGEB18Q96M61 343 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 GFM1Q96RP9 751 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 WDR83Q9BRX9 315 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 SAYSD1Q9NPB0 183 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ABCF3Q9NUQ8 709 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 FGFR1OP2Q9NVK5 253 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 HAUS2Q9NVX0 235 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ZNF148Q9UQR1 794 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 OR51B4Q9Y5P0 310 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 FADS3Q9Y5Q0 445 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 U3KQA8 63 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ITPR3Q14573 2671 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 LRRD1A4D1F6 860 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 H0YHG0 523 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 I6L893 689 aaPredicted RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 TERTO14746 1132 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 YY2O15391 372 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 H2AFYO75367 372 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 RPLP0P05388 317 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 KRT7P08729 469 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 IFNGR1P15260 489 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 TAC1P20366 129 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PSMA2P25787 234 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 SLC5A2P31639 672 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PLK1P53350 603 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PHC1P78364 1004 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 SLC6A3Q01959 620 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 GPS1Q13098 491 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 POLD3Q15054 466 aaPredicted RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 CARD16Q5EG05 197 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 NEK5Q6P3R8 708 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ENPP7Q6UWV6 458 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 OLFML1Q6UWY5 402 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PPP1R21Q6ZMI0 780 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ABI3BPQ7Z7G0 1075 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 SFTPA2Q8IWL1 248 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 NAT8LQ8N9F0 302 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 AHCYL2Q96HN2 611 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC77Q9BR77 488 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 LRRC61Q9BV99 259 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms