RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 PHYKPLQ8IUZ5 450 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 SYCE1Q8N0S2 351 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 RASGEF1CQ8N431 466 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 CCDC112Q8NEF3 446 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 OR4K2Q8NGD2 314 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 OR13J1Q8NGT2 312 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 CCHCR1Q8TD31 782 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 BLOC1S5Q8TDH9 187 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 FBF1Q8TES7 1133 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 SNRNP27Q8WVK2 155 aaKnown RBP7.5□□□□□ -1.21
TCF4-260ENST00000627685 C1orf54Q8WWF1 131 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 DNAJC1Q96KC8 554 aaKnown RBP7.5□□□□□ -1.21
TCF4-260ENST00000627685 GFM1Q96RP9 751 aaKnown RBP7.5□□□□□ -1.21
TCF4-260ENST00000627685 NRTNQ99748 197 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 TIMM29Q9BSF4 260 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 YIPF2Q9BWQ6 316 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 GPR63Q9BZJ6 419 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 SPRY4Q9C004 299 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 B3GNT4Q9C0J1 378 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 STRADBQ9C0K7 418 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 DPEP2Q9H4A9 486 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 RMI1Q9H9A7 625 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 SARS2Q9NP81 518 aaKnown RBP7.5□□□□□ -1.21
TCF4-260ENST00000627685 PRDM8Q9NQV8 689 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 PIH1D1Q9NWS0 290 aaKnown RBP7.5□□□□□ -1.21
TCF4-260ENST00000627685 SIDT1Q9NXL6 827 aaKnown RBP7.5□□□□□ -1.21
TCF4-260ENST00000627685 GOLGA6AQ9NYA3 693 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 SMARCAL1Q9NZC9 954 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 HACD3Q9P035 362 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 FOXJ2Q9P0K8 574 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 LRIT1Q9P2V4 623 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 ACTL7BQ9Y614 415 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 SLC30A1Q9Y6M5 507 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 AHCTF1Q8WYP5 2266 aa7.5□□□□□ -1.21
TCF4-260ENST00000627685 MN1Q10571 1320 aaPredicted RBP7.5□□□□□ -1.21
TCF4-260ENST00000627685 GLYATL1P3A0A0U1RQE8 302 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 TCRBV7S3A2A0A539 114 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 OR51F1A6NGY5 319 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 GPR89AB7ZAQ6 455 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 PLD2O14939 933 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 NVLO15381 856 aaKnown RBP7.49□□□□□ -1.21
TCF4-260ENST00000627685 GRID2O43424 1007 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 VEGFDO43915 354 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 IPO7O95373 1038 aaKnown RBP7.49□□□□□ -1.21
TCF4-260ENST00000627685 PRAMEF1O95521 474 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 CCDC175P0C221 793 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 GPR89BP0CG08 455 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 RAB6AP20340 208 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 FOXN2P32314 431 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 RPL22P35268 128 aaKnown RBP7.49□□□□□ -1.21
TCF4-260ENST00000627685 PPP1CAP62136 330 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 NFATC2Q13469 925 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 CLCA4Q14CN2 919 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 CYP1B1Q16678 543 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 PARP6Q2NL67 630 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 P3H1Q32P28 736 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 BCL7AQ4VC05 210 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 SOWAHCQ53LP3 525 aaPredicted RBP7.49□□□□□ -1.21
TCF4-260ENST00000627685 C3orf38Q5JPI3 329 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 AGAP9Q5VTM2 703 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 NKAIN2Q5VXU1 208 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 ITPRIPL1Q6GPH6 555 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 DARS2Q6PI48 645 aaKnown RBP7.49□□□□□ -1.21
TCF4-260ENST00000627685 RAB11FIP2Q7L804 512 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 CHST15Q7LFX5 561 aaPredicted RBP7.49□□□□□ -1.21
TCF4-260ENST00000627685 GLT6D1Q7Z4J2 308 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 UBL4BQ8N7F7 174 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 BRSK1Q8TDC3 778 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 LINC00615Q96LM1 132 aaPredicted RBP7.49□□□□□ -1.21
TCF4-260ENST00000627685 DPYSL5Q9BPU6 564 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 TBL1YQ9BQ87 522 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 SPATA16Q9BXB7 569 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 TBC1D10AQ9BXI6 508 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 TSGA10Q9BZW7 698 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 LZTFL1Q9NQ48 299 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 CASS4Q9NQ75 786 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 MOSPD1Q9UJG1 213 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 MGAQ8IWI9 3026 aa7.49□□□□□ -1.21
TCF4-260ENST00000627685 CFAP46Q8IYW2 2715 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 TEX51A0A1B0GUA7 166 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 LILRA5A6NI73 299 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 OR52A4PA6NMU1 304 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.48□□□□□ -1.21
TCF4-260ENST00000627685 TP73O15350 636 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 KRT86O43790 486 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 ANXA9O76027 345 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 SRP72O76094 671 aaKnown RBP7.48□□□□□ -1.21
TCF4-260ENST00000627685 TMEM63AO94886 807 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 TNFSF15O95150 251 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 SLC25A14O95258 325 aaPredicted RBP7.48□□□□□ -1.21
TCF4-260ENST00000627685 CPNE6O95741 557 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 C9P02748 559 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 GSTP1P09211 210 aaKnown RBP7.48□□□□□ -1.21
TCF4-260ENST00000627685 TPBGLP0DKB5 382 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 FGF3P11487 239 aaPredicted RBP7.48□□□□□ -1.21
TCF4-260ENST00000627685 CCL4P13236 92 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 ZNF7P17097 686 aaPredicted RBP7.48□□□□□ -1.21
TCF4-260ENST00000627685 TPH1P17752 444 aa7.48□□□□□ -1.21
TCF4-260ENST00000627685 LPOP22079 712 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms