RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CD84Q9UIB8 345 aa19.35■□□□□ 0.69
PCDHB11-202ENST00000624887 ASPDHA6ND91 283 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 EEDO75530 441 aaKnown RBP19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 HSD17B1P14061 328 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 ATP1B2P14415 290 aaPredicted RBP19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 SLC6A2P23975 617 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 VASPP50552 380 aaPredicted RBP19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 POLR2JP52435 117 aaKnown RBP19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 DCDC1P59894 354 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 ARSIQ5FYB1 569 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 IL23RQ5VWK5 629 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 ICA1LQ8NDH6 482 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 CATSPER1Q8NEC5 780 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 ADCY4Q8NFM4 1077 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 PROKR1Q8TCW9 393 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 VPS33AQ96AX1 596 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 ZNF707Q96C28 371 aaPredicted RBP19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 NTMT1Q9BV86 223 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 SPATA16Q9BXB7 569 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 TRIM54Q9BYV2 358 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 SLC8A2Q9UPR5 921 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 AP4S1Q9Y587 144 aa19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 PRRC2BQ5JSZ5 2229 aaKnown RBP19.34■□□□□ 0.69
PCDHB11-202ENST00000624887 FAM234BA2RU67 622 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 CCDC154A6NI56 674 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 DNAJA2O60884 412 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 ANXA5P08758 320 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 POU2F2P09086 479 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 DHCR24Q15392 516 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 NR6A1Q15406 480 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 SPATS1Q496A3 300 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 HSD11B1LQ7Z5J1 315 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 DHFR2Q86XF0 187 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 TICAM1Q8IUC6 712 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 TMEM102Q8N9M5 508 aaPredicted RBP19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 FAM83DQ9H4H8 585 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 SUN2Q9UH99 717 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 MBD1Q9UIS9 605 aaPredicted RBP19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 LEF1Q9UJU2 399 aaPredicted RBP19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 CCL27Q9Y4X3 112 aa19.33■□□□□ 0.69
PCDHB11-202ENST00000624887 UPK3BL1B0FP48 263 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 UPK3BL2E5RIL1 263 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 NUAK1O60285 661 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 STK16O75716 305 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 RNASEH2AO75792 299 aaKnown RBP19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 STAMBPO95630 424 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 EBLN1P0CF75 366 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 EPB42P16452 691 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 NFKBIAP25963 317 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 CALRP27797 417 aaKnown RBP19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 IL12AP29459 219 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 RPIAP49247 311 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 CAPRIN1Q14444 709 aaKnown RBP19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 TTC23LQ6PF05 361 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 HOMEZQ8IX15 550 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 DCUN1D1Q96GG9 259 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 LRRC3BQ96PB8 259 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 HBEGFQ99075 208 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 VCXQ9H320 206 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 PCDH12Q9NPG4 1184 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 CMTM6Q9NX76 183 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 IL36AQ9UHA7 158 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 TRPS1Q9UHF7 1281 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 SCOCQ9UIL1 159 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 PDE10AQ9Y233 779 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 MRPS23Q9Y3D9 190 aaKnown RBP19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 PCDHA9Q9Y5H5 950 aa19.33■□□□□ 0.68
PCDHB11-202ENST00000624887 DYTNA2CJ06 578 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 C8GP07360 202 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 CTSLP07711 333 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 ENO2P09104 434 aaPredicted RBP19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 CISD3P0C7P0 127 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 TIMP2P16035 220 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 WEE1P30291 646 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC7A1P30825 629 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 AKT1P31749 480 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 GGT5P36269 586 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PIK3CGP48736 1102 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 CDKL1Q00532 357 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PRKG2Q13237 762 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 NFYCQ13952 458 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 TLR1Q15399 786 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 CYP2R1Q6VVX0 501 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 MBOAT1Q6ZNC8 495 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 DET1Q7L5Y6 550 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 ZFAND4Q86XD8 727 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 CELF5Q8N6W0 485 aaKnown RBP19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 SCAMP4Q969E2 229 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 ZUFSPQ96AP4 578 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PPP3R2Q96LZ3 170 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC12A9Q9BXP2 914 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 ARL15Q9NXU5 204 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 GMPR2Q9P2T1 348 aaKnown RBP19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 DPP7Q9UHL4 492 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PLXNA2O75051 1894 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 PER2O15055 1255 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 WDR47O94967 919 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 ARHGEF15O94989 841 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 CYP17A1P05093 508 aa19.32■□□□□ 0.68
PCDHB11-202ENST00000624887 RB1P06400 928 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms