RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 GID8Q9NWU2 228 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 TEKT2Q9UIF3 430 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 NRXN2Q9P2S2 1712 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 EPOPA6NHQ4 379 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 C5orf67F2Z3F1 127 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 HOXC11O43248 304 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 FAM153BP0C7A2 387 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 NDUFV2P19404 249 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 SLC1A2P43004 574 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 SERPINB4P48594 390 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 SPINT3P49223 89 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 RPL38P63173 70 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 CYTH1Q15438 398 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 FAM153CQ494X1 144 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 COLEC12Q5KU26 742 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 PRAMEF13Q5VWM6 474 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 NADSYN1Q6IA69 706 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 TCAIMQ8N3R3 496 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 TRAM1L1Q8N609 369 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 PGAP3Q96FM1 320 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 REXO5Q96IC2 774 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 APOLD1Q96LR9 279 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 MRPL57Q9BQC6 102 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 HCN3Q9P1Z3 774 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 COPS7AQ9UBW8 275 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 SEC16AO15027 2179 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 CAPN8A6NHC0 703 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 MATN4O95460 622 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 F7P08709 466 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 CASRP41180 1078 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 MAGEA9P43362 315 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 RACK1P63244 317 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 SRSF11Q05519 484 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 ZNF460Q14592 562 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 ZC3H12BQ5HYM0 836 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 DCUN1D3Q8IWE4 304 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 FAM162AQ96A26 154 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 IMP4Q96G21 291 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 TTYH1Q9H313 450 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 PIF1Q9H611 641 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 ARMC7Q9H6L4 198 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 IPPKQ9H8X2 491 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 DDX18Q9NVP1 670 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 KIF17Q9P2E2 1029 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 PPIEQ9UNP9 301 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 MTO1Q9Y2Z2 717 aaKnown RBP8.93□□□□□ -0.98
HDAC9-229ENST00000622668 CLCA3PQ9Y6N3 262 aa8.93□□□□□ -0.98
HDAC9-229ENST00000622668 LRRC37AA6NMS7 1700 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 MYO1GB0I1T2 1018 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 CHUKO15111 745 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 UBDO15205 165 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 B4GALT2O60909 372 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 LCA5LO95447 670 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 PROS1P07225 676 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 SERPINB5P36952 375 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 MTAPQ13126 283 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 ASTE1Q2TB18 679 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TTC27Q6P3X3 843 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 NXNL1Q96CM4 212 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 CNDP1Q96KN2 507 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TACO1Q9BSH4 297 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 C6orf106Q9H6K1 298 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 ACSS3Q9H6R3 686 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 EQTNQ9NQ60 294 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TM7SF3Q9NS93 570 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 ATAD3AQ9NVI7 634 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 GMNCA6NCL1 334 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 GTPBP1O00178 669 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TLR4O00206 839 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 ALOX15BO15296 676 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 RRP8O43159 456 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 VEGFDO43915 354 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 OR2B3O76000 313 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 SERPINE1P05121 402 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 SHMT2P34897 504 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 SGSHP51688 502 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 COPZ1P61923 177 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 ALDH6A1Q02252 535 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 NIPAL4Q0D2K0 466 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 GNA13Q14344 377 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 ANGPT1Q15389 498 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 AGKQ53H12 422 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 MED27Q6P2C8 311 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 OR2A12Q8NGT7 310 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 INTS10Q9NVR2 710 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 LRIT1Q9P2V4 623 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 SPAG17Q6Q759 2223 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 NPIPB15A6NHN6 443 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 C2orf74A8MZ97 194 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 FAM155BO75949 473 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TMEM63AO94886 807 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 CPN2P22792 545 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 CD27P26842 260 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 RAB8AP61006 207 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 FASTKD3Q14CZ7 662 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 RASA2Q15283 850 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 BROXQ5VW32 411 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TRMT10BQ6PF06 316 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TXNDC11Q6PKC3 985 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms