RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 DPP3Q9NY33 737 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 GLS2Q9UI32 602 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 TBC1D24Q9ULP9 559 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 SNX6Q9UNH7 406 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 USP3Q9Y6I4 520 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 PCNTO95613 3336 aa7.4□□□□□ -1.23
TRIM49B-202ENST00000622138 CITO14578 2027 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 PRR23AA6NEV1 266 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 OR6C70A6NIJ9 312 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 A8MUA0 341 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 EFCAB9A8MZ26 197 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 EEF2KO00418 725 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 BTN3A1O00481 513 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 AP3D1O14617 1153 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 MFSD11O43934 449 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SSX4O60224 188 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 TPST1O60507 370 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ALPPP05187 535 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 C2P06681 752 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SNRPB2P08579 225 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 GOT1P17174 413 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 MAGP20916 626 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 MGAT1P26572 445 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 HSD17B2P37059 387 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 HOXA1P49639 335 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SESN2P58004 480 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 EMX1Q04741 257 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 IL18R1Q13478 541 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 DPYSL2Q16555 572 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 IMPG1Q17R60 797 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 AAK1Q2M2I8 961 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SPANXN2Q5MJ10 180 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 TMEM198Q66K66 360 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 NAPRTQ6XQN6 538 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM124AQ86V42 546 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 PIGZQ86VD9 579 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 TP53INP2Q8IXH6 220 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 LINC01465Q8N7H1 131 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ZBTB44Q8NCP5 570 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 WDR48Q8TAF3 677 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SLC35F5Q8WV83 523 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ARNTL2Q8WYA1 636 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 NDRG1Q92597 394 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 FOXJ1Q92949 421 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SGK3Q96BR1 496 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 OR2A14Q96R47 310 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 TBCBQ99426 244 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 HOPXQ9BPY8 73 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SPATA9Q9BWV2 254 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 GATA5Q9BWX5 397 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 C6orf62Q9GZU0 229 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SPNS1Q9H2V7 528 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 PRMT7Q9NVM4 692 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ELF5Q9UKW6 265 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 STAP1Q9ULZ2 295 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 MTF2Q9Y483 593 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 PCDHB3Q9Y5E6 796 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 LYVE1Q9Y5Y7 322 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ZFC3H1O60293 1989 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 POLR2AP24928 1970 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 TRAV6A0A075B6T7 132 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 A0A1B0GVM2 712 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ATP6AP2A0A1C7CYW4 349 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 E5RI56 91 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 G3V2L1 256 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 NRP2O60462 931 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 KATNA1O75449 491 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ADORA3P0DMS8 318 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 INSRRP14616 1297 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 POU3F3P20264 500 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ZP3P21754 424 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ATP4BP51164 291 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 GTF2A2P52657 109 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 LSM3P62310 102 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 PITX1P78337 314 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 RBP5P82980 135 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ELOAQ14241 798 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 FASTKQ14296 549 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF273Q14593 569 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 FAM187BQ17R55 369 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 OTUD1Q5VV17 481 aaPredicted RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 BSPRYQ5W0U4 402 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 CASC4Q6P4E1 433 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 NRARPQ7Z6K4 114 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 CMC1Q7Z7K0 106 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 APOBEC3FQ8IUX4 373 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 CHCHD4Q8N4Q1 142 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ZMIZ2Q8NF64 920 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 KBTBD8Q8NFY9 601 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 OR7G3Q8NG95 312 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 FRS2Q8WU20 508 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 SMG7Q92540 1137 aaKnown RBP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 AKAP1Q92667 903 aaKnown RBP eCLIP7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 AP2M1Q96CW1 435 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 KIF12Q96FN5 646 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 MIR1-1HGQ9H1L0 117 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ASB7Q9H672 318 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 ENTPD7Q9NQZ7 604 aa7.39□□□□□ -1.23
TRIM49B-202ENST00000622138 CHRAC1Q9NRG0 131 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms