RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CNPP09543 421 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 CALRP27797 417 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 SPAM1P38567 509 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 HSPA7P48741 367 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 SLC7A9P82251 487 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 PWP1Q13610 501 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 MAP7Q14244 749 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 NR6A1Q15406 480 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 TTC23LQ6PF05 361 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 MILR1Q7Z6M3 343 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 GPR65Q8IYL9 337 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 NXPE1Q8N323 547 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 CLDN19Q8N6F1 224 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 FAM47BQ8NA70 645 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 TNIP2Q8NFZ5 429 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 FIBINQ8TAL6 211 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 BIRC7Q96CA5 298 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 NMD3Q96D46 503 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 ECHDC3Q96DC8 303 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 TMEM169Q96HH4 297 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 ZNF558Q96NG5 402 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 THEGQ9P2T0 379 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 ZNF510Q9Y2H8 683 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 PIKFYVEQ9Y2I7 2098 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 EIF3FO00303 357 aaPredicted RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 TULP3O75386 442 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 RSL1D1O76021 490 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 GNAO1P09471 354 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 EBLN1P0CF75 366 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 CBSLP0DN79 551 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 NCK1P16333 377 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 CBSP35520 551 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 OR4D2P58180 307 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 PLOD1Q02809 727 aaPredicted RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 LMAN2Q12907 356 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 CHRNA6Q15825 494 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 FUT11Q495W5 492 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 CNKSR3Q6P9H4 555 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 DEFB128Q7Z7B8 93 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 AADATQ8N5Z0 425 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 DIS3LQ8TF46 1054 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 OSCP1Q8WVF1 389 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 USP7Q93009 1102 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 CGREF1Q99674 301 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 KIAA1522Q9P206 1035 aaPredicted RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 HELZP42694 1942 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 IGLV3-16A0A075B6K0 115 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 NPIPB15A6NHN6 443 aaPredicted RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 K7EPI3 171 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SLC28A1O00337 649 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 RGS14O43566 566 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 LILRB3O75022 631 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 IGSF6O95976 241 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 URODP06132 367 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CDH1P12830 882 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GGT5P36269 586 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 MAD2L1Q13257 205 aaPredicted RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 RBBP5Q15291 538 aaKnown RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 DEFB115Q30KQ5 88 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 PLEKHG6Q3KR16 790 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 MPPE1Q53F39 396 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 DGKKQ5KSL6 1271 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 USP51Q70EK9 711 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 IFNEQ86WN2 208 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 DTWD1Q8N5C7 304 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GLB1L3Q8NCI6 653 aaPredicted RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 OR2AP1Q8NGE2 309 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 OR52E4Q8NGH9 312 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 MCCC1Q96RQ3 725 aaPredicted RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 SLC29A3Q9BZD2 475 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GORASP2Q9H8Y8 452 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 MRPL17Q9NRX2 175 aaKnown RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 OPTCQ9UBM4 332 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 LSM7Q9UK45 103 aaKnown RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 OGDHLQ9ULD0 1010 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CLEC4EQ9ULY5 219 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 USP22Q9UPT9 525 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 POLR3HQ9Y535 204 aaPredicted RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 TPST1O60507 370 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 LDLRP01130 860 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GGT1P19440 569 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 UGT1A1P22309 533 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 UGT1A4P22310 534 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SERPINA4P29622 427 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 HMOX2P30519 316 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GKP32189 559 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 UGT1A3P35503 534 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 UGT1A5P35504 534 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CASP2P42575 452 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 NSG1P42857 185 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SELPLGQ14242 412 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GBX1Q14549 363 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDPN-212ENST00000621990 CYBRD1Q53TN4 286 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CRTC1Q6UUV9 634 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GAREM2Q75VX8 874 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 TMC8Q8IU68 726 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SLC13A3Q8WWT9 602 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms