RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZNF451Q9Y4E5 1061 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 DOPEY1Q5JWR5 2465 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 SEC16AO15027 2179 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 RAD51CO43502 376 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 VEGFDO43915 354 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 CPNE3O75131 537 aaKnown RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 KLK3P07288 261 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 PIRTP0C851 137 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 EBLN1P0CF75 366 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 MX2P20592 715 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 IL4RP24394 825 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 COL8A1P27658 744 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 GJC1P36383 396 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 PTGIRP43119 386 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 PLCL1Q15111 1095 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 PDPK2PQ6A1A2 396 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 ALKBH5Q6P6C2 394 aaKnown RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 WASH2PQ6VEQ5 465 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 ZNF547Q8IVP9 402 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 TRAM1L1Q8N609 369 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 NIPA2Q8N8Q9 360 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 GDAP1Q8TB36 358 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.66□□□□□ -1.186e-7■■■■■ 27.3
CLK1-215ENST00000621181 MR1Q95460 341 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 EID2BQ96D98 161 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 SLC41A2Q96JW4 573 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 ZNF514Q96K75 400 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 BTBD6Q96KE9 485 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 CALR3Q96L12 384 aaKnown RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 TTC25Q96NG3 672 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 ZIM3Q96PE6 472 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 KRT12Q99456 494 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 GPR63Q9BZJ6 419 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 RAB33BQ9H082 229 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 WASH6PQ9NQA3 447 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 RAD18Q9NS91 495 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 IP6K2Q9UHH9 426 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 NFU1Q9UMS0 254 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 PACSIN2Q9UNF0 486 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 SNX7Q9UNH6 387 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 FARSAQ9Y285 508 aaKnown RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 SPTBP11277 2137 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 UBA6A0AVT1 1052 aaPredicted RBP7.65□□□□□ -1.18
CLK1-215ENST00000621181 ESYT3A0FGR9 886 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 MYO1FO00160 1098 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 KCNK1O00180 336 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 EIF3HO15372 352 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLK1-215ENST00000621181 SCRG1O75711 98 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 LPOP22079 712 aaPredicted RBP7.65□□□□□ -1.18
CLK1-215ENST00000621181 CORO7P57737 925 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 HSD11B2P80365 405 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 GTF2H3Q13889 308 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 DPYSL3Q14195 570 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 PAFAH1B3Q15102 231 aaKnown RBP7.65□□□□□ -1.18
CLK1-215ENST00000621181 RPS6KA1Q15418 735 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 HADHQ16836 314 aaKnown RBP7.65□□□□□ -1.18
CLK1-215ENST00000621181 ZFYVE27Q5T4F4 411 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 AGAP9Q5VTM2 703 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 KMT5CQ86Y97 462 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 RHOT1Q8IXI2 618 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 KCTD6Q8NC69 237 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 FDCSPQ8NFU4 85 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 FATE1Q969F0 183 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 HES6Q96HZ4 224 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 TSGA13Q96PP4 275 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 MAP3K3Q99759 626 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 NUP85Q9BW27 656 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 TSPYL1Q9H0U9 437 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 THAP2Q9H0W7 228 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 ISCUQ9H1K1 167 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 TTC7AQ9ULT0 858 aaPredicted RBP7.65□□□□□ -1.18
CLK1-215ENST00000621181 WDR37Q9Y2I8 494 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 PCDHGB7Q9Y5F8 929 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 NFS1Q9Y697 457 aa7.65□□□□□ -1.18
CLK1-215ENST00000621181 TLCD2A6NGC4 264 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 A6NL46 340 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 TMEM63AO94886 807 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 CLDN1O95832 211 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 JCHAINP01591 159 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 MMP2P08253 660 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 H2AFZP0C0S5 128 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 DCTP40126 519 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 GUCY2DQ02846 1103 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 GBE1Q04446 702 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 TMEM115Q12893 351 aaPredicted RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 TCEAL1Q15170 157 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 PCSK7Q16549 785 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 KHDC1Q4VXA5 237 aaKnown RBP7.64□□□□□ -1.19
CLK1-215ENST00000621181 IZUMO3Q5VZ72 239 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 SLC6A19Q695T7 634 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 H2AFVQ71UI9 128 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 TMC3Q7Z5M5 1100 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 NT5DC3Q86UY8 548 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 MAP7D3Q8IWC1 876 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 Q8NA96 180 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 WNT2BQ93097 391 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 HDAC11Q96DB2 347 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 ZNF670Q9BS34 389 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 GOLPH3Q9H4A6 298 aa7.64□□□□□ -1.19
CLK1-215ENST00000621181 MAGEE1Q9HCI5 957 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms