RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 DNAJC28Q9NX36 388 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TOR4AQ9NXH8 423 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 NOP53Q9NZM5 478 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 IL1RAPL1Q9NZN1 696 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ATXN10Q9UBB4 475 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GULP1Q9UBP9 304 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 KLQ9UEF7 1012 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SLC23A2Q9UGH3 650 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 RIMKLBQ9ULI2 386 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 DOLKQ9UPQ8 538 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SLC17A4Q9Y2C5 497 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PRKAB1Q9Y478 270 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PCDHGA8Q9Y5G5 932 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 DNMT3AQ9Y6K1 912 aaPredicted RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PRSS21Q9Y6M0 314 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 U3KQA8 63 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 HELZ2Q9BYK8 2649 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 RP1L1Q8IWN7 2480 aaPredicted RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ZFC3H1O60293 1989 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PIEZO2Q9H5I5 2752 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 IGLV3-16A0A075B6K0 115 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 GLYATL1P3A0A0U1RQE8 302 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ZCWPW2A0A1B0GU75 182 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SPAARA0A1B0GVQ0 90 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 EXOC1LA0A1B0GW35 172 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PRSS38A1L453 326 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 C2orf81A6NN90 581 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 TCP11X1B4DZS4 312 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 E7ESA3 106 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 GOLGA8TH3BQL2 631 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 H7C0S8 307 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 KLF11O14901 512 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SIGLEC6O43699 453 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SRP72O76094 671 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 UNC5CO95185 931 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PRAMEF1O95521 474 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ATP6V1G2O95670 118 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ASMTLO95671 621 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CRTAMO95727 393 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 GOT2P00505 430 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 TROVE2P10155 538 aaKnown RBP eCLIP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MLNP12872 115 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 JUPP14923 745 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF8P17098 575 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 VCLP18206 1134 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ADRA1DP25100 572 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CNTFP26441 200 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 AK4P27144 223 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CD82P27701 267 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MC4RP32245 332 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 GCKP35557 465 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 HADHAP40939 763 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 GNPDA1P46926 289 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 NPY2RP49146 381 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 UCNP55089 124 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 GPLD1P80108 840 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SARNPP82979 210 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 DAB2P98082 770 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 FOXC1Q12948 553 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 NFATC2Q13469 925 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 TRA2AQ13595 282 aaKnown RBP eCLIP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ITGA9Q13797 1035 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 NR1D2Q14995 579 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 TBCCQ15814 346 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PDK4Q16654 411 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 KYNUQ16719 465 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ANKRD20A4Q4UJ75 823 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF658BQ4V348 819 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PYCR3Q53H96 274 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PRRT3Q5FWE3 981 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PCID2Q5JVF3 399 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 HP1BP3Q5SSJ5 553 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CDCP2Q5VXM1 449 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ADGRD1Q6QNK2 874 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 FAM83HQ6ZRV2 1179 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ASRGL1Q7L266 308 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 RD3Q7Z3Z2 195 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 C11orf96Q7Z7L8 435 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 LDB1Q86U70 411 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 TRABD2AQ86V40 505 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 C17orf82Q86X59 251 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CCNJLQ8IV13 435 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 NXPE1Q8N323 547 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 LILRA3Q8N6C8 439 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 EID2Q8N6I1 236 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 RASGEF1AQ8N9B8 481 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 DNAAF3Q8N9W5 541 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 DDHD1Q8NEL9 900 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MDM1Q8TC05 714 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 LRRC8CQ8TDW0 803 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 LMX1AQ8TE12 382 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 DENND1AQ8TEH3 1009 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PYROXD1Q8WU10 500 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 STYXQ8WUJ0 223 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ZFPM2Q8WW38 1151 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MTBPQ96DY7 904 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MFSD3Q96ES6 412 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 HIC2Q96JB3 615 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF578Q96N58 590 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM74Q96NL1 305 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms