RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 EN2P19622 333 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 CCNA2P20248 432 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 IMPDH1P20839 514 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 MATN1P21941 496 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 NKX2-5P52952 324 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 RAD23AP54725 363 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 LRRC26Q2I0M4 334 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 KIAA0408Q6ZU52 694 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 GPSM1Q86YR5 675 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 Q8N9G6 341 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 LMNTD1Q8N9Z9 388 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 MAGEE2Q8TD90 523 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 TFAP2CQ92754 450 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 EID2BQ96D98 161 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 AARSD1Q9BTE6 412 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 POLE4Q9NR33 117 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 HCFC2Q9Y5Z7 792 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 VWA8A3KMH1 1905 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 GREB1Q4ZG55 1949 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 WASH4PA8MWX3 477 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 H3BNC9 293 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 SLC25A14O95258 325 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 SOD2P04179 222 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 NCK1P16333 377 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 RING1Q06587 406 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 BOP1Q14137 746 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 REP15Q6BDI9 236 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 RETSATQ6NUM9 610 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 ADGRG2Q8IZP9 1017 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 STAG3L4Q8TBR4 150 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 ISL2Q96A47 359 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 UBXN10Q96LJ8 280 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 TCF12Q99081 682 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 MCMBPQ9BTE3 642 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 EMILIN2Q9BXX0 1053 aa14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 NYNRINQ9P2P1 1898 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-208ENST00000617339 CCDC85CA6NKD9 419 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 GMNNO75496 209 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ATP6V1B2P21281 511 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 MLLT10P55197 1068 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 IL2P60568 153 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 MERTKQ12866 999 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 NFATC3Q12968 1075 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ARHGAP15Q53QZ3 475 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ANKS6Q68DC2 871 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 SERPINA9Q86WD7 417 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 TEX26Q8N6G2 289 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 SCAIQ8N9R8 606 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 RDH11Q8TC12 318 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 METTL6Q8TCB7 284 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ACDQ96AP0 544 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 CLPBQ9H078 707 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ADNPQ9H2P0 1102 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 NSUN3Q9H649 340 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 GIN1Q9NXP7 522 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 SLAMF8Q9P0V8 285 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 POU2F3Q9UKI9 436 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 OAZ3Q9UMX2 235 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 A0A0C4DFX4 3053 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 HIDE1A8MVS5 230 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ESRRBO95718 433 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 PAX3P23760 479 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 MOGQ16653 247 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 C6orf10Q5SRN2 563 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 OTUD3Q5T2D3 398 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 PRR23BQ6ZRT6 265 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 TMEM25Q86YD3 366 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 FNDC5Q8NAU1 212 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 CHPT1Q8WUD6 406 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 VTI1BQ9UEU0 232 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 A0A0J9YYE9 177 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ANGPT2O15123 496 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 MAN1A2O60476 641 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ALDOCP09972 364 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 SLC7A1P30825 629 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ACADVLP49748 655 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ST8SIA6P61647 398 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 TIAL1Q01085 375 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 TIGD2Q4W5G0 525 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 THOC7Q6I9Y2 204 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 IL27RAQ6UWB1 636 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 RALGPS2Q86X27 583 aaPredicted RBP14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 SLC43A3Q8NBI5 491 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 HHIPL1Q96JK4 782 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ELAC1Q9H777 363 aaKnown RBP14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ZFYVE1Q9HBF4 777 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 PDFQ9HBH1 243 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 ATAD3AQ9NVI7 634 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 USP22Q9UPT9 525 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 MYO15AQ9UKN7 3530 aa14.24□□□□□ -0.13
SHROOM1-208ENST00000617339 TRAV19A0A0A6YYK7 116 aa14.23□□□□□ -0.13
SHROOM1-208ENST00000617339 ILVBLA1L0T0 632 aa14.23□□□□□ -0.13
SHROOM1-208ENST00000617339 FAM92AA1XBS5 289 aa14.23□□□□□ -0.13
SHROOM1-208ENST00000617339 EI24O14681 340 aa14.23□□□□□ -0.13
SHROOM1-208ENST00000617339 TBC1D4O60343 1298 aa14.23□□□□□ -0.13
SHROOM1-208ENST00000617339 IGLV3-27P01718 113 aa14.23□□□□□ -0.13
SHROOM1-208ENST00000617339 TCEA1P23193 301 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms