RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 LEF1Q9UJU2 399 aaPredicted RBP27.52■■■□□ 2
CSPG5-205ENST00000610462 PLXNA2O75051 1894 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 LINC01553A4QN01 128 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 DPPA5A6NC42 116 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 TTC34A8MYJ7 566 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 SLC9A3R1O14745 358 aaPredicted RBP27.52■■■□□ 2
CSPG5-205ENST00000610462 UBTFL6P0CB48 400 aaPredicted RBP27.52■■■□□ 2
CSPG5-205ENST00000610462 NNMTP40261 264 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 NFYCQ13952 458 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 CAMK1Q14012 370 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 GBX1Q14549 363 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 NR6A1Q15406 480 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 CYP2R1Q6VVX0 501 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 RNF165Q6ZSG1 346 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 PROKR1Q8TCW9 393 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 SORCS1Q8WY21 1168 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 ZUFSPQ96AP4 578 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 NTMT1Q9BV86 223 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 SMOXQ9NWM0 555 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 PCDHA9Q9Y5H5 950 aa27.52■■■□□ 2
CSPG5-205ENST00000610462 LEFTY1O75610 366 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 LYNP07948 512 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 ANXA5P08758 320 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 CEBPBP17676 345 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 IL12AP29459 219 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 SLC7A1P30825 629 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 ZNF697Q5TEC3 545 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 ING5Q8WYH8 240 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 HERVK_113Q902F9 699 aa27.51■■□□□ 1.99
CSPG5-205ENST00000610462 TSPAN11A1L157 253 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 ATP1B2P14415 290 aaPredicted RBP27.5■■□□□ 1.99
CSPG5-205ENST00000610462 BNIP2Q12982 314 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 TLR1Q15399 786 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 ARSIQ5FYB1 569 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 PAGE3Q5JUK9 113 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 SLCO4A1Q96BD0 722 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 HBEGFQ99075 208 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 TRPS1Q9UHF7 1281 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 CCL27Q9Y4X3 112 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 ZNF197O14709 1029 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 RNASEH1O60930 286 aaKnown RBP27.5■■□□□ 1.99
CSPG5-205ENST00000610462 AP5B1Q2VPB7 878 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 IRAK1BP1Q5VVH5 260 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 MBOAT1Q6ZNC8 495 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 HSD11B1LQ7Z5J1 315 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 ZFAND4Q86XD8 727 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 PPP3R2Q96LZ3 170 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 FAM83DQ9H4H8 585 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 FBXO10Q9UK96 956 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 ALPK3Q96L96 1907 aa27.5■■□□□ 1.99
CSPG5-205ENST00000610462 DYTNA2CJ06 578 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 STK16O75716 305 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 WDR47O94967 919 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 EBLN1P0CF75 366 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 EPB42P16452 691 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 PIK3CGP48736 1102 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 RPIAP49247 311 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 DCDC1P59894 354 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 PRKG2Q13237 762 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 CBX2Q14781 532 aaPredicted RBP27.49■■□□□ 1.99
CSPG5-205ENST00000610462 TTC23LQ6PF05 361 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 DET1Q7L5Y6 550 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 SPRED2Q7Z698 418 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 OR2T34Q8NGX1 318 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 OR2T3Q8NH03 318 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 TMEM125Q96AQ2 219 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 MBD1Q9UIS9 605 aaPredicted RBP27.49■■□□□ 1.99
CSPG5-205ENST00000610462 SLC8A2Q9UPR5 921 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 PDE10AQ9Y233 779 aa27.49■■□□□ 1.99
CSPG5-205ENST00000610462 NUP210Q8TEM1 1887 aaPredicted RBP27.48■■□□□ 1.99
CSPG5-205ENST00000610462 UPK3BL1B0FP48 263 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 UPK3BL2E5RIL1 263 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 C5orf67F2Z3F1 127 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 NUAK1O60285 661 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 ENO2P09104 434 aaPredicted RBP27.48■■□□□ 1.99
CSPG5-205ENST00000610462 MPC1LP0DKB6 136 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 TIMP2P16035 220 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 AKT1P31749 480 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 CDKL1Q00532 357 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 FOLH1Q04609 750 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 UBE2R2Q712K3 238 aaPredicted RBP27.48■■□□□ 1.99
CSPG5-205ENST00000610462 HOMEZQ8IX15 550 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 TRIM15Q9C019 465 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 PCDH12Q9NPG4 1184 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 SLC28A1O00337 649 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 RGS14O43566 566 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 C8GP07360 202 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 G6PDP11413 515 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 ATP6V1B2P21281 511 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 NFKBIAP25963 317 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 YBX1P67809 324 aaKnown RBP27.48■■□□□ 1.99
CSPG5-205ENST00000610462 DHCR24Q15392 516 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 TIGD2Q4W5G0 525 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 CYP20A1Q6UW02 462 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 SLC12A9Q9BXP2 914 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 ARL15Q9NXU5 204 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 IL36AQ9UHA7 158 aa27.48■■□□□ 1.99
CSPG5-205ENST00000610462 GRXCR2A6NFK2 248 aa27.47■■□□□ 1.99
CSPG5-205ENST00000610462 GGT5P36269 586 aa27.47■■□□□ 1.99
CSPG5-205ENST00000610462 VASPP50552 380 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms