RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 OLAHQ9NV23 265 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 NPAP1Q9NZP6 1156 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 WDR35Q9P2L0 1181 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 RHCGQ9UBD6 479 aa4.09□□□□□ -1.75
SMCHD1-213ENST00000609587 A0A0B4J293 547 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 A0A0G2JNG1 304 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 CTAGE9A4FU28 777 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 C5orf60A6NFR6 353 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 HEPACAM2A8MVW5 462 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 TSPAN1O60635 241 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 TBX10O75333 385 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 MED24O75448 989 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 LIPFP07098 398 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 CTAGE8P0CG41 777 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 DGKAP23743 735 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 FMO5P49326 533 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 MMP15P51511 669 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 CSE1LP55060 971 aaKnown RBP4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 KIR2DS5Q14953 304 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 ASPRV1Q53RT3 343 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 C1orf141Q5JVX7 400 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 KLC3Q6P597 504 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 KCTD8Q6ZWB6 473 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 LONP2Q86WA8 852 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 CTAGE4Q8IX94 777 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 POC1AQ8NBT0 407 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 OR6J1Q8NGC5 347 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 EXD1Q8NHP7 514 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 CD101Q93033 1021 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 NXNL1Q96CM4 212 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 SLX1AQ9BQ83 275 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 LRRC1Q9BTT6 524 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 FNDC11Q9BVV2 318 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 DPAGT1Q9H3H5 408 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 OPA3Q9H6K4 179 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 EQTNQ9NQ60 294 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 ABCF3Q9NUQ8 709 aa4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 ZHX1Q9UKY1 873 aaPredicted RBP4.08□□□□□ -1.76
SMCHD1-213ENST00000609587 EDDM13A0A1B0GTR0 161 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 A0A1W2PS18 150 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 ELOVL7A1L3X0 281 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 ANKUB1A6NFN9 424 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 C16orf97H3BN30 126 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 H7C0S8 307 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 SYNGR3O43761 229 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 TADA2AO75478 443 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 PDE9AO76083 593 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 H1F0P07305 194 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 LINGO3P0C6S8 592 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 CSF2RAP15509 400 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 MC5RP33032 325 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 PITX1P78337 314 aaPredicted RBP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 PRKAA1Q13131 559 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 DUOXA1Q1HG43 343 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 SIRPB2Q5JXA9 342 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 PDSS1Q5T2R2 415 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 RNASEH2BQ5TBB1 312 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 PIWIL4Q7Z3Z4 852 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 DSG4Q86SJ6 1040 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 IQCHQ86VS3 1027 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF595Q8IYB9 648 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 MAB21L3Q8N8X9 362 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 DAZLQ92904 295 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF653Q96CK0 615 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 RMDN1Q96DB5 314 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 GPR88Q9GZN0 384 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 ANKZF1Q9H8Y5 726 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 TBC1D17Q9HA65 648 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 TXLNGQ9NUQ3 528 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 C5AR2Q9P296 337 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 GIMAP2Q9UG22 337 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 IL17BQ9UHF5 180 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 SLC24A2Q9UI40 661 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 OSGIN1Q9UJX0 560 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 GRIP1Q9Y3R0 1128 aa4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 SPIN1Q9Y657 262 aaPredicted RBP4.07□□□□□ -1.76
SMCHD1-213ENST00000609587 TRIP12Q14669 1992 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 TEX13DA0A0J9YY54 714 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 A0A1B0GUV1 79 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 MED19A0JLT2 244 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 URADA6NGE7 173 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 TSPY2A6NKD2 308 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 A8MXE2 369 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 CAPN9O14815 690 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 DIAPH2O60879 1101 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 BAG4O95429 457 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 TSPY3P0CV98 308 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 TSPY8P0CW00 308 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 CETPP11597 493 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF75DP51815 510 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 TSPY1Q01534 308 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 POU3F1Q03052 451 aaPredicted RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 RALGDSQ12967 914 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 HSPB3Q12988 150 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF852Q6ZMS4 543 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 FOXL2NBQ6ZUU3 175 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 TTC30BQ8N4P2 665 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 METTL27Q8N6F8 245 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms