RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 REM1O75628 298 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 GOT2P00505 430 aaKnown RBP12.91□□□□□ -0.34
USP6NL-205ENST00000609104 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
USP6NL-205ENST00000609104 RTP1P59025 263 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 LRRC52Q8N7C0 313 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 PLD5Q8N7P1 536 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 RASGEF1AQ8N9B8 481 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 PTPRJQ12913 1337 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 PRLP01236 227 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 VIPP01282 170 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 ASGR1P07306 291 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 CD48P09326 243 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 CMPK1P30085 196 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 C4orf46Q504U0 113 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
USP6NL-205ENST00000609104 TCEAL6Q6IPX3 200 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 RASSF5Q8WWW0 418 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 PEX16Q9Y5Y5 336 aa12.91□□□□□ -0.34
USP6NL-205ENST00000609104 PRAMEF17Q5VTA0 474 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 RANBP3LQ86VV4 465 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CIR1Q86X95 450 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 UNC93B1Q9H1C4 597 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 MAFFQ9ULX9 164 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 AHCYP23526 432 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 ATXN7L2Q5T6C5 722 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 ZDHHC20Q5W0Z9 365 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 ZCCHC10Q8TBK6 192 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 MFSD3Q96ES6 412 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CXCR6O00574 342 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CYB5AP00167 134 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 LINGO3P0C6S8 592 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 GRK6P43250 576 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 TARDBPQ13148 414 aaKnown RBP eCLIP12.9□□□□□ -0.346e-7■■■□□ 18.9
USP6NL-205ENST00000609104 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 B3GNT4Q9C0J1 378 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 ZFP37Q9Y6Q3 630 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 MMP8P22894 467 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 WASP42768 502 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CD83Q01151 205 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 LAPTM5Q13571 262 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 DACT2Q5SW24 774 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 TVP23BQ9NYZ1 205 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 GRIN2DO15399 1336 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 MAGEB17A8MXT2 336 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CDK14O94921 469 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 ARCN1P48444 511 aaKnown RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 FSTL4Q6MZW2 842 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 SIDT2Q8NBJ9 832 aaKnown RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 OR6K6Q8NGW6 343 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 HMCESQ96FZ2 354 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 REXO2Q9Y3B8 237 aaKnown RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 OGNP20774 298 aaKnown RBP12.9□□□□□ -0.34
USP6NL-205ENST00000609104 PRDX6P30041 224 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 MSANTD2Q6P1R3 559 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 IQCKQ8N0W5 287 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CPT1BQ92523 772 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 GIN1Q9NXP7 522 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 OR6C70A6NIJ9 312 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 TLL1O43897 1013 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 ZNF823P16415 610 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 GJD3Q8N144 294 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 KCNC2Q96PR1 638 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 NUDT4Q9NZJ9 180 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CDH7Q9ULB5 785 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 TLL2Q9Y6L7 1015 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 A0A1W2PQ67 120 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 PRAMEF1O95521 474 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 CDKN2BP42772 138 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 OR2B6P58173 313 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 NDUFA9Q16795 377 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 MAU2Q9Y6X3 613 aa12.9□□□□□ -0.34
USP6NL-205ENST00000609104 OR4F21O95013 312 aa12.9□□□□□ -0.35
USP6NL-205ENST00000609104 GRM5P41594 1212 aa12.9□□□□□ -0.35
USP6NL-205ENST00000609104 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.35
USP6NL-205ENST00000609104 ZNF782Q6ZMW2 699 aaPredicted RBP12.9□□□□□ -0.35
USP6NL-205ENST00000609104 MKL1Q969V6 931 aa12.9□□□□□ -0.35
USP6NL-205ENST00000609104 FAM84AQ96KN4 292 aa12.9□□□□□ -0.35
USP6NL-205ENST00000609104 KXD1Q9BQD3 176 aa12.9□□□□□ -0.35
USP6NL-205ENST00000609104 METTL8Q9H825 291 aaKnown RBP12.9□□□□□ -0.35
USP6NL-205ENST00000609104 UBIAD1Q9Y5Z9 338 aa12.9□□□□□ -0.35
USP6NL-205ENST00000609104 LRRC72A6NJI9 287 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 PGDP52209 483 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 KLHL35Q6PF15 583 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 GALNT7Q86SF2 657 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 ARMC5Q96C12 935 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 C7orf26Q96N11 449 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 SPATA9Q9BWV2 254 aa12.89□□□□□ -0.35
USP6NL-205ENST00000609104 EIF2B4Q9UI10 523 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms