RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 AP4E1Q9UPM8 1137 aa8.97□□□□□ -0.97
CTCFL-220ENST00000608858 MEMO1Q9Y316 297 aa8.97□□□□□ -0.97
CTCFL-220ENST00000608858 NKX2-6A6NCS4 301 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 K7ELQ4 463 aaPredicted RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 SOCS6O14544 535 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 MAFKO60675 156 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 POP7O75817 140 aaKnown RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 SLCO2B1O94956 709 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 RASAL1O95294 804 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 LSM8O95777 96 aaKnown RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 PRLP01236 227 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 PIRTP0C851 137 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 FOSL1P15407 271 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 AGAP20933 346 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 AMPD1P23109 780 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 PBLDP30039 288 aaPredicted RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 MMP13P45452 471 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 MEOX1P50221 254 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 DSC2Q02487 901 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 MFAP5Q13361 173 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 XRCC4Q13426 336 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 DEFB110Q30KQ9 67 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 ANKRD20A8PQ5CZ79 823 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 KIRREL2Q6UWL6 708 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 WASH2PQ6VEQ5 465 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 CDHR3Q6ZTQ4 885 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 TRAPPC5Q8IUR0 188 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 FAM20CQ8IXL6 584 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 ZNF655Q8N720 491 aaPredicted RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 DNAJB8Q8NHS0 232 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 GDAP1Q8TB36 358 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 CCHCR1Q8TD31 782 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 COG1Q8WTW3 980 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 NAT14Q8WUY8 206 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 N4BP2L2Q92802 583 aaPredicted RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 EID2BQ96D98 161 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 LMF1Q96S06 567 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 PCDHB18PQ96TA0 734 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 DPH2Q9BQC3 489 aaPredicted RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 MGME1Q9BQP7 344 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 TRIM56Q9BRZ2 755 aaKnown RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 ETNK2Q9NVF9 386 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 PKD2L2Q9NZM6 624 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 ADAM22Q9P0K1 906 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 SHOC2Q9UQ13 582 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 PLEKHA6Q9Y2H5 1048 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 TTLL3Q9Y4R7 772 aa8.96□□□□□ -0.98
CTCFL-220ENST00000608858 NCOA6Q14686 2063 aaPredicted RBP8.96□□□□□ -0.98
CTCFL-220ENST00000608858 DYTNA2CJ06 578 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 SIGLEC16A6NMB1 481 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 OR2B3O76000 313 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 GFPT2O94808 682 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 PRDX3P30048 256 aaKnown RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 TNFSF10P50591 281 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 ZNF143P52747 638 aaPredicted RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 TMPRSS15P98073 1019 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 OGDHQ02218 1023 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 TMEM115Q12893 351 aaPredicted RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 PTP4A2Q12974 167 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 NFE2L1Q14494 772 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 KRT33BQ14525 404 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 NKAIN1Q4KMZ8 207 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 ZNF569Q5MCW4 686 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 DPY19L2P1Q6NXN4 242 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 MRPL14Q6P1L8 145 aaKnown RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 C11orf96Q7Z7L8 435 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 BIVMQ86UB2 503 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 SPPL2CQ8IUH8 684 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 GPR135Q8IZ08 494 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 FMR1NBQ8N0W7 255 aaPredicted RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 BBS5Q8N3I7 341 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 SIRT6Q8N6T7 355 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 EPS8L1Q8TE68 723 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 NSMCE1Q8WV22 266 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 GLYATL1Q969I3 302 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 CCDC34Q96HJ3 373 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 ZNF599Q96NL3 588 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 MCEEQ96PE7 176 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 TIMM29Q9BSF4 260 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 WWP1Q9H0M0 922 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 SOX17Q9H6I2 414 aaPredicted RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 ZFYVE1Q9HBF4 777 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 ZNF160Q9HCG1 818 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 FAM60AQ9NP50 221 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 SLC22A11Q9NSA0 550 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 IRAK4Q9NWZ3 460 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 DNAJB12Q9NXW2 375 aaKnown RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 CWC15Q9P013 229 aaKnown RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 TMPRSS11EQ9UL52 423 aa8.95□□□□□ -0.98
CTCFL-220ENST00000608858 FN1P02751 2386 aaKnown RBP8.95□□□□□ -0.98
CTCFL-220ENST00000608858 TRAV17A0A0B4J275 112 aa8.94□□□□□ -0.98
CTCFL-220ENST00000608858 BICDL2A1A5D9 508 aa8.94□□□□□ -0.98
CTCFL-220ENST00000608858 ZWINTO95229 277 aa8.94□□□□□ -0.98
CTCFL-220ENST00000608858 CRYABP02511 175 aaKnown RBP8.94□□□□□ -0.98
CTCFL-220ENST00000608858 CYP1A1P04798 512 aaPredicted RBP8.94□□□□□ -0.98
CTCFL-220ENST00000608858 POLBP06746 335 aa8.94□□□□□ -0.98
CTCFL-220ENST00000608858 HBQ1P09105 142 aa8.94□□□□□ -0.98
CTCFL-220ENST00000608858 UNGP13051 313 aaPredicted RBP8.94□□□□□ -0.98
CTCFL-220ENST00000608858 VCLP18206 1134 aa8.94□□□□□ -0.98
CTCFL-220ENST00000608858 UGT1A4P22310 534 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms