RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ABRQ12979 859 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 BNIP2Q12982 314 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 RAB39AQ14964 217 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SLC1A5Q15758 541 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 YIF1BQ5BJH7 314 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PAGE2BQ5JRK9 111 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 THEM4Q5T1C6 240 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CES4AQ5XG92 561 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 KIAA0408Q6ZU52 694 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SLC24A5Q71RS6 500 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ERN2Q76MJ5 926 aaKnown RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 HORMAD1Q86X24 394 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 LSRQ86X29 649 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ZSWIM9Q86XI8 627 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MAPKAPK5Q8IW41 473 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CNTN4Q8IWV2 1026 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 C1orf127Q8N9H9 656 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CLRN3Q8NCR9 226 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TMEM35BQ8NCS4 154 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF417Q8TAU3 575 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CA5BP1Q8WTZ4 195 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 NUDT8Q8WV74 236 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SCLYQ96I15 445 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 FER1L6-AS2Q96M78 137 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF587Q96SQ5 575 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 IL12RB2Q99665 862 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TRAF4Q9BUZ4 470 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SAV1Q9H4B6 383 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TRABDQ9H4I3 376 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 IFT46Q9NQC8 304 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PRDM8Q9NQV8 689 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PCDHB16Q9NRJ7 776 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 C20orf96Q9NUD7 363 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PARVAQ9NVD7 372 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ARPP21Q9UBL0 812 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 KCNK7Q9Y2U2 307 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PRELID3BQ9Y3B1 194 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 GMPPBQ9Y5P6 360 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 KLF2Q9Y5W3 355 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 XDHP47989 1333 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 NRCAMQ92823 1304 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 DOCK2Q92608 1830 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ISPDA4D126 451 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 H3BNC9 293 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 GRM8O00222 908 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TGM6O95932 706 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PDGFBP01127 241 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 POMCP01189 267 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 GHRHP01286 108 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 APOC1P02654 83 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 LIPFP07098 398 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PROS1P07225 676 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MYL2P10916 166 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CETPP11597 493 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 NCF2P19878 526 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MAGP20916 626 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MAOBP27338 520 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SLC7A1P30825 629 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CHRNA3P32297 505 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TOB1P50616 345 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SLC18A1P54219 525 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ATP12AP54707 1039 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 NAB1Q13506 487 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MED22Q15528 200 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 FSCN1Q16658 493 aaKnown RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 UBE2SQ16763 222 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ARHGAP15Q53QZ3 475 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PRAMEF20Q5VT98 475 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CIAPIN1Q6FI81 312 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 SYCE2Q6PIF2 218 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 MSANTD1Q6ZTZ1 278 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PAGE2Q7Z2X7 111 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PRPF39Q86UA1 669 aaKnown RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ALYREFQ86V81 257 aaKnown RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TMEM126BQ8IUX1 230 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CCDC103Q8IW40 242 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 LRRC57Q8N9N7 239 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 FNDC5Q8NAU1 212 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 BPIFCQ8NFQ6 507 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 OR2T34Q8NGX1 318 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 STYXQ8WUJ0 223 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 DEPDC1BQ8WUY9 529 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 KCNE4Q8WWG9 221 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 ROBO4Q8WZ75 1007 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 DIO2Q92813 273 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 WNT8BQ93098 351 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 APOPT1Q96IL0 206 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TWNKQ96RR1 684 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 DSCC1Q9BVC3 393 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TSSK1BQ9BXA7 367 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 NPLQ9BXD5 320 aaPredicted RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CACNG6Q9BXT2 260 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 PRRG3Q9BZD7 231 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 RNPEPQ9H4A4 650 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 KCNK13Q9HB14 408 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 AKIP1Q9NQ31 210 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CACNG4Q9UBN1 327 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 EIF3KQ9UBQ5 218 aaKnown RBP4.66□□□□□ -1.66
LINC01109-201ENST00000603837 CHRNA9Q9UGM1 479 aa4.66□□□□□ -1.66
LINC01109-201ENST00000603837 TMPRSS11EQ9UL52 423 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms