RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 KIAA1522Q9P206 1035 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF1-220ENST00000600274 OAZ3Q9UMX2 235 aa11.34□□□□□ -0.59
ARHGEF1-220ENST00000600274 GPR45Q9Y5Y3 372 aa11.34□□□□□ -0.59
ARHGEF1-220ENST00000600274 PATJQ8NI35 1801 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 XIRP2A4UGR9 3374 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 PER2O15055 1255 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 AXIN1O15169 862 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 MTA1Q13330 715 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 SELPLGQ14242 412 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 PGS1Q32NB8 556 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 INO80DQ53TQ3 878 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 ALG1LQ6GMV1 187 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 TXNDC11Q6PKC3 985 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 CYP20A1Q6UW02 462 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 UGT2A3Q6UWM9 527 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 SNX20Q7Z614 316 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 GALNT7Q86SF2 657 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 PHYKPLQ8IUZ5 450 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 APLFQ8IW19 511 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 TMEM102Q8N9M5 508 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 MYRFLQ96LU7 910 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 POPDC3Q9HBV1 291 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 ATXN10Q9UBB4 475 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 FXYD1O00168 92 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 CASQ2O14958 399 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 ULK1O75385 1050 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 B3GALT4O96024 378 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 GNAO1P09471 354 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 HALP42357 657 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 ACADVLP49748 655 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 OR4D2P58180 307 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 SNRPD1P62314 119 aaKnown RBP11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 ERVK-8P63133 956 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 ABRQ12979 859 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 PLCL1Q15111 1095 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 TEAD2Q15562 447 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 NANOGP8Q6NSW7 305 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 HMBOX1Q6NT76 420 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 CRTC1Q6UUV9 634 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 SBSNQ6UWP8 590 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 SPRED2Q7Z698 418 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 PHACTR4Q8IZ21 702 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 OVCA2Q8WZ82 227 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 HHIPL1Q96JK4 782 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRIM15Q9C019 465 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 NANOGQ9H9S0 305 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 AIG1Q9NVV5 245 aa11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 LEF1Q9UJU2 399 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF1-220ENST00000600274 A0A1W2PP18 115 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 TPD52L2O43399 206 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 SRCP12931 536 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 FASP25445 335 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 SLC7A1P30825 629 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 CCR2P41597 374 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 RPL5P46777 297 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 RPIAP49247 311 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 MYBPC1Q00872 1141 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 SF1Q15637 639 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 C5orf22Q49AR2 442 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 GTDC1Q4AE62 458 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 MPPE1Q53F39 396 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 B3GNT6Q6ZMB0 384 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 UBE2R2Q712K3 238 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 DGCR14Q96DF8 476 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 HSPBAP1Q96EW2 488 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 MED8Q96G25 268 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZBTB18Q99592 522 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 DPY30Q9C005 99 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 MAGEE1Q9HCI5 957 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 B4GALT6Q9UBX8 382 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 HCFC2Q9Y5Z7 792 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 OR7A17O14581 309 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 GNGT2O14610 69 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 RSL1D1O76021 490 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 WDR47O94967 919 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 OTCP00480 354 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 EPB42P16452 691 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 LAG3P18627 525 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 PRKCQQ04759 706 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 COL9A2Q14055 689 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 KIAA2013Q8IYS2 634 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 CRIPAKQ8N1N5 446 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 LIX1Q8N485 282 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 SELENOMQ8WWX9 145 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 ROPN1LQ96C74 230 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 BTBD9Q96Q07 612 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 HOPXQ9BPY8 73 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 EBPLQ9BY08 206 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 NUDT4Q9NZJ9 180 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 PIKFYVEQ9Y2I7 2098 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 DFNA5O60443 496 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 CLTBP09497 229 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 HIST1H2AGP0C0S8 130 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 HIST1H2ADP20671 130 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 TPD52P55327 224 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 WDR5P61964 334 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 LAPTM5Q13571 262 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms