RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 CSE1LP55060 971 aaKnown RBP12.48□□□□□ -0.41
UPF1-208ENST00000600012 CCL7P80098 99 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 TCEA2Q15560 299 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 FASTKD1Q53R41 847 aaKnown RBP12.48□□□□□ -0.41
UPF1-208ENST00000600012 ZNF789Q5FWF6 425 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 LIPIQ6XZB0 460 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 CILP2Q8IUL8 1156 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 C2CD4AQ8NCU7 369 aaPredicted RBP12.48□□□□□ -0.41
UPF1-208ENST00000600012 GPR26Q8NDV2 337 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 GPR156Q8NFN8 814 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 PDXPQ96GD0 296 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 NSMCE4AQ9NXX6 385 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 PKD2L2Q9NZM6 624 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 CD84Q9UIB8 345 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 OR1A2Q9Y585 309 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 DGKBQ9Y6T7 804 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 SPTA1P02549 2419 aa12.48□□□□□ -0.41
UPF1-208ENST00000600012 GLYATL1P3A0A0U1RQE8 302 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 A0A1W2PPM1 405 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 HMX2A2RU54 273 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 CACNB4O00305 520 aaPredicted RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 KRT38O76015 456 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 PRAMEF1O95521 474 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 AHSGP02765 367 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 SNRPAP09012 282 aaKnown RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 JMJD7P0C870 316 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 GM2AP17900 193 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 OGNP20774 298 aaKnown RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 KELP23276 732 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 SPRP35270 261 aaPredicted RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 CD151P48509 253 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 SPINT3P49223 89 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 LIG3P49916 1009 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 LIMK2P53671 638 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 KIAA1024LP59773 190 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 MAGOHP61326 146 aaKnown RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 ACOX1Q15067 660 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 CHRNA6Q15825 494 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 MROH9Q5TGP6 573 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 MRNIPQ6NTE8 343 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 Q6ZVL8 140 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 TAOK1Q7L7X3 1001 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 TRABD2AQ86V40 505 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 ZC3HC1Q86WB0 502 aaKnown RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 LMNTD2Q8IXW0 634 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 SRRM1Q8IYB3 904 aaKnown RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 PIANPQ8IYJ0 282 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 CBARPQ8N350 705 aaPredicted RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 GPR150Q8NGU9 434 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 GABPB2Q8TAK5 448 aaPredicted RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 COL26A1Q96A83 441 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 VPS39Q96JC1 886 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 MCMBPQ9BTE3 642 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 STMN4Q9H169 189 aaPredicted RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 IL26Q9NPH9 171 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 APPL1Q9UKG1 709 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 MTO1Q9Y2Z2 717 aaKnown RBP12.47□□□□□ -0.41
UPF1-208ENST00000600012 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 TENM4Q6N022 2769 aa12.47□□□□□ -0.41
UPF1-208ENST00000600012 GOLGA8RI6L899 631 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 NVLO15381 856 aaKnown RBP12.46□□□□□ -0.41
UPF1-208ENST00000600012 SLC28A2O43868 658 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 HAUS5O94927 633 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 LIPCP11150 499 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 HGFP14210 728 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 CREB1P16220 341 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 PNLIPP16233 465 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 GLB1P16278 677 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 UGT1A6P19224 532 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 ITGALP20701 1170 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 UGT1A1P22309 533 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 UGT1A4P22310 534 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 ATP5DP30049 168 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 HPDP32754 393 aaPredicted RBP12.46□□□□□ -0.41
UPF1-208ENST00000600012 UGT1A3P35503 534 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 ETV3P41162 512 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 CACNG1Q06432 222 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 TYSND1Q2T9J0 566 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 RBM20Q5T481 1227 aaKnown RBP12.46□□□□□ -0.41
UPF1-208ENST00000600012 LGSNQ5TDP6 509 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 XKR5Q6UX68 686 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 KIAA0408Q6ZU52 694 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 TAS2R42Q7RTR8 314 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 MTERF4Q7Z6M4 381 aaKnown RBP12.46□□□□□ -0.41
UPF1-208ENST00000600012 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 EXOC3L1Q86VI1 746 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 C4orf33Q8N1A6 199 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 OR56A4Q8NGH8 313 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 OR1E3Q8WZA6 343 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 TMEM159Q96B96 161 aa12.46□□□□□ -0.41
UPF1-208ENST00000600012 SGSM3Q96HU1 749 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms