RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 RASGEF1CQ8N431 466 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 CLDN19Q8N6F1 224 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 ACVR1CQ8NER5 493 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 SLC39A7Q92504 469 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 ELMO1Q92556 727 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 KIAA1143Q96AT1 154 aaPredicted RBP13.81□□□□□ -0.2
LIG1-218ENST00000599322 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 EFHD1Q9BUP0 239 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 AP1M1Q9BXS5 423 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 KIR3DX1Q9H7L2 352 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 MVB12BQ9H7P6 319 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 PDE7BQ9NP56 450 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 CATSPERZQ9NTU4 200 aa13.81□□□□□ -0.2
LIG1-218ENST00000599322 HELZ2Q9BYK8 2649 aaKnown RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 MAGEB16A2A368 324 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 NDUFS3O75489 264 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 FOXN2P32314 431 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 COILP38432 576 aaPredicted RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 ARSDP51689 593 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 TERF1P54274 439 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 GFERP55789 205 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 IL11RAQ14626 422 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 TMED2Q15363 201 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 PPP1R7Q15435 360 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 TAF1BQ53T94 588 aaPredicted RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 ANKS6Q68DC2 871 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 PTRHD1Q6GMV3 140 aaKnown RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 CAPRIN2Q6IMN6 1127 aaKnown RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 MRNIPQ6NTE8 343 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 PRSS42Q7Z5A4 293 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 KMT5CQ86Y97 462 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 RASGRP3Q8IV61 690 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 PIANPQ8IYJ0 282 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 GLIS1Q8NBF1 620 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 SIDT2Q8NBJ9 832 aaKnown RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 ACTRT1Q8TDG2 376 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 LCN9Q8WX39 176 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 RSC1A1Q92681 617 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 TFGQ92734 400 aaPredicted RBP13.8□□□□□ -0.2
LIG1-218ENST00000599322 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 MS4A14Q96JA4 679 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 SRMSQ9H3Y6 488 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 CPNE5Q9HCH3 593 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 CHRAC1Q9NRG0 131 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 FOXJ2Q9P0K8 574 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 SLC24A2Q9UI40 661 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 B3GALT1Q9Y5Z6 326 aa13.8□□□□□ -0.2
LIG1-218ENST00000599322 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 OR6C74A6NCV1 312 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 OR5K3A6NET4 321 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 OR51F1A6NGY5 319 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 K7ENP7 123 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 TK2O00142 265 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 KPNA5O15131 536 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 CD3EAPO15446 510 aaKnown RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 ZIC2O95409 532 aaPredicted RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 RPN2P04844 631 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 APOA4P06727 396 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 PRSS56P0CW18 603 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 MAP4P27816 1152 aaKnown RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 GNG11P61952 73 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 ACY1Q03154 408 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 ACVR1Q04771 509 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 BOP1Q14137 746 aaKnown RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 TTC23LQ6PF05 361 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 INO80CQ6PI98 192 aaPredicted RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 BPHLQ86WA6 291 aaPredicted RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 LRRC6Q86X45 466 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 CARFQ8N187 725 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 MPP5Q8N3R9 675 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 LSM14AQ8ND56 463 aaKnown RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 OR13J1Q8NGT2 312 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 GPR150Q8NGU9 434 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 GABPB2Q8TAK5 448 aaPredicted RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 NAT14Q8WUY8 206 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 RMDN2Q96LZ7 410 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 PANX3Q96QZ0 392 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 CTRCQ99895 268 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 ZNF768Q9H5H4 540 aaKnown RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 MRM3Q9HC36 420 aaKnown RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 XAB2Q9HCS7 855 aaKnown RBP13.79□□□□□ -0.2
LIG1-218ENST00000599322 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 SLC2A6Q9UGQ3 507 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 POLG2Q9UHN1 485 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 SNX12Q9UMY4 172 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 ASF1AQ9Y294 204 aa13.79□□□□□ -0.2
LIG1-218ENST00000599322 TLCD2A6NGC4 264 aa13.78□□□□□ -0.2
LIG1-218ENST00000599322 PRMT5O14744 637 aaPredicted RBP13.78□□□□□ -0.2
LIG1-218ENST00000599322 SGTAO43765 313 aa13.78□□□□□ -0.2
LIG1-218ENST00000599322 RAD1O60671 282 aa13.78□□□□□ -0.2
LIG1-218ENST00000599322 PHF2O75151 1096 aa13.78□□□□□ -0.2
LIG1-218ENST00000599322 CCNYL3P0C7X3 344 aa13.78□□□□□ -0.2
LIG1-218ENST00000599322 MGAT1P26572 445 aa13.78□□□□□ -0.2
LIG1-218ENST00000599322 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
LIG1-218ENST00000599322 LEPRP48357 1165 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms