RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TMEM126BQ8IUX1 230 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 CCDC50Q8IVM0 306 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 OR13C4Q8NGS5 318 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 ADAMTS17Q8TE56 1095 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 PSMG3-AS1Q96PY0 264 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 FAM118BQ9BPY3 351 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 CHST8Q9H2A9 424 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.29□□□□□ -0.12
IRF3-223ENST00000599223 POMT2Q9UKY4 750 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 BTRCQ9Y297 605 aa14.29□□□□□ -0.12
IRF3-223ENST00000599223 UNC79Q9P2D8 2635 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 BLACEA4D250 179 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 ARGFXA6NJG6 315 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 ZBTB11O95625 1053 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 POLBP06746 335 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 GP1BBP13224 206 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 POLR2CP19387 275 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 LPOP22079 712 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 TNNT3P45378 269 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 PRLHRP49683 370 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 ARL4DP49703 201 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 TAF1AQ15573 450 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 ZNF658BQ4V348 819 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 PRR30Q53SZ7 412 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 HIST2H2BCQ6DN03 193 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 CAPRIN2Q6IMN6 1127 aaKnown RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 FAM198BQ6UWH4 519 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 RANBP10Q6VN20 620 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 SYVN1Q86TM6 617 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 MR1Q95460 341 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
IRF3-223ENST00000599223 GPR87Q9BY21 358 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 FAM96AQ9H5X1 160 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 ASB8Q9H765 288 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 SOHLH2Q9NX45 425 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 CCDC88CQ9P219 2028 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 TRHDEQ9UKU6 1024 aa14.28□□□□□ -0.12
IRF3-223ENST00000599223 SLC9B1P1A6NJY1 282 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 AGAP14A8MT82 685 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 HACD1B0YJ81 288 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 APOC4-APOC2K7ER74 178 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 SORBS2O94875 1100 aaKnown RBP14.27□□□□□ -0.13
IRF3-223ENST00000599223 ZRANB2O95218 330 aaKnown RBP eCLIP14.27□□□□□ -0.13
IRF3-223ENST00000599223 IPO7O95373 1038 aaKnown RBP14.27□□□□□ -0.13
IRF3-223ENST00000599223 APOC2P02655 101 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 PRSS56P0CW18 603 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 RNF224P0DH78 156 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 RORAP35398 523 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 GEMP55040 296 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 TMPRSS15P98073 1019 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 PLEKHS1Q5SXH7 462 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 C11orf63Q6NUN7 778 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 BPHLQ86WA6 291 aaPredicted RBP14.27□□□□□ -0.13
IRF3-223ENST00000599223 RCOR2Q8IZ40 523 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 NXPE1Q8N323 547 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 ENDOVQ8N8Q3 282 aaKnown RBP14.27□□□□□ -0.13
IRF3-223ENST00000599223 OR4E2Q8NGC2 313 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 ACTL9Q8TC94 416 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 MLXIPLQ9NP71 852 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 ACSL5Q9ULC5 683 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 PYCARDQ9ULZ3 195 aa14.27□□□□□ -0.13
IRF3-223ENST00000599223 ESPL1Q14674 2120 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 MACROD2A1Z1Q3 448 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 GOLGA6L9A6NEM1 432 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 H7C0C1 242 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 BTN3A3O00478 584 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 BTN3A1O00481 513 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 PJA2O43164 708 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 CAPN1P07384 714 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 PVRP15151 417 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 ST6GAL1P15907 406 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 GNLYP22749 145 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 MAGEA1P43355 309 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 ATP5OP48047 213 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 CDKN1CP49918 316 aaPredicted RBP14.26□□□□□ -0.13
IRF3-223ENST00000599223 PGDP52209 483 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 OTUD4Q01804 1114 aaKnown RBP14.26□□□□□ -0.13
IRF3-223ENST00000599223 PAPD7Q5XG87 772 aaKnown RBP14.26□□□□□ -0.13
IRF3-223ENST00000599223 DENND5AQ6IQ26 1287 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 ATCAYQ86WG3 371 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 CFAP206Q8IYR0 622 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 DSELQ8IZU8 1212 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 OR1L3Q8NH93 324 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 CCDC110Q8TBZ0 833 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 HM13Q8TCT9 377 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 THAP4Q8WY91 577 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 RBM41Q96IZ5 413 aaKnown RBP14.26□□□□□ -0.13
IRF3-223ENST00000599223 SLC25A23Q9BV35 468 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 KLHL25Q9H0H3 589 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 ING2Q9H160 280 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 OR52A5Q9H2C5 316 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 COG4Q9H9E3 785 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 LATS2Q9NRM7 1088 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 KCND1Q9NSA2 647 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 PCMTD2Q9NV79 361 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 LUZP4Q9P127 313 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 CRLS1Q9UJA2 301 aa14.26□□□□□ -0.13
IRF3-223ENST00000599223 NUP210LQ5VU65 1888 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms