RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 ADAMTS20P59510 1910 aa11.78□□□□□ -0.52
ARHGEF1-216ENST00000598587 C1QTNF9BB2RNN3 333 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 EIF3HO15372 352 aaKnown RBP eCLIP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 C1QTNF9P0C862 333 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 JMJD7P0C870 316 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 RBMS1P29558 406 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 CSTF2P33240 577 aaKnown RBP eCLIP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 ELK3P41970 407 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 SLC1A2P43004 574 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 PREPP48147 710 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 LSSP48449 732 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 ZFP36L1Q07352 338 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 HSPA14Q0VDF9 509 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 PDIA2Q13087 525 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 BRD3Q15059 726 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 ZNF658BQ4V348 819 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 DUPD1Q68J44 220 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 ARMC6Q6NXE6 501 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 MICALCLQ6ZW33 695 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 USP53Q70EK8 1073 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 RAB11FIP2Q7L804 512 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 OOSP2Q86WS3 158 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 MARCH9Q86YJ5 346 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 SLITRK4Q8IW52 837 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 CEP112Q8N8E3 955 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 ACVR1CQ8NER5 493 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 TFGQ92734 400 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 CERS2Q96G23 380 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 ZDHHC12Q96GR4 267 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 CCDC74BQ96LY2 380 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 FERD3LQ96RJ6 166 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 INSM2Q96T92 566 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 TBC1D10AQ9BXI6 508 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 PHACTR1Q9C0D0 580 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 TRIT1Q9H3H1 467 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 PPANQ9NQ55 473 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 POLG2Q9UHN1 485 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 CRYL1Q9Y2S2 319 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 PCDHGA8Q9Y5G5 932 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 MN1Q10571 1320 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-216ENST00000598587 AKAP13Q12802 2813 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 IGHV5-10-1A0A0J9YXX1 117 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 SLC5A10A0PJK1 596 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 MATN2O00339 956 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 PLD2O14939 933 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 TOX3O15405 576 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 BANF1O75531 89 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 MPOP05164 745 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 THRAP10827 490 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 ITGB6P18564 788 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 AOAHP28039 575 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 PDHA2P29803 388 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 FMO4P31512 558 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 CCR7P32248 378 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 CSF2RBP32927 897 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 ILF2Q12905 390 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 PRKAA1Q13131 559 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 TTLL9Q3SXZ7 439 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 MSS51Q4VC12 460 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 GLE1Q53GS7 698 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 HSP90AA5PQ58FG0 334 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 PLEKHS1Q5SXH7 462 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 CYB5D1Q6P9G0 228 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 FOXR1Q6PIV2 292 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 KIAA0408Q6ZU52 694 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 CEP128Q6ZU80 1094 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 B3GNT8Q7Z7M8 397 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 TBC1D21Q8IYX1 336 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 ZBED8Q8IZ13 594 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 SLC22A15Q8IZD6 547 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 AGGF1Q8N302 714 aaeCLIP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 FBXO39Q8N4B4 442 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 LILRA3Q8N6C8 439 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 AGBL5Q8NDL9 886 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 FBXO36Q8NEA4 188 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 FOPNLQ96NB1 174 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 TRIM56Q9BRZ2 755 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 TMEM121BQ9BXQ6 578 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 FAM129AQ9BZQ8 928 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 RAB33BQ9H082 229 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 SEMA6CQ9H3T2 930 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 THSD1Q9NS62 852 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 IARS2Q9NSE4 1012 aaKnown RBP11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 SLC24A2Q9UI40 661 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 FBXO5Q9UKT4 447 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 ASF1AQ9Y294 204 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 LOXL2Q9Y4K0 774 aa11.76□□□□□ -0.53
ARHGEF1-216ENST00000598587 KNTC1P50748 2209 aa11.75□□□□□ -0.53
ARHGEF1-216ENST00000598587 E7ESA3 106 aa11.75□□□□□ -0.53
ARHGEF1-216ENST00000598587 BRINP1O60477 761 aa11.75□□□□□ -0.53
ARHGEF1-216ENST00000598587 RASSF9O75901 435 aa11.75□□□□□ -0.53
ARHGEF1-216ENST00000598587 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms