RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PKMP14618 531 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 PDHA2P29803 388 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 MAPK9P45984 424 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 CARSP49589 748 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 ADARP55265 1226 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 MPP1Q00013 466 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 CBLBQ13191 982 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 KRT33BQ14525 404 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 ZNF789Q5FWF6 425 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 CTSL3PQ5NE16 218 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 CAPRIN2Q6IMN6 1127 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 DUS1LQ6P1R4 473 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 CAPN12Q6ZSI9 719 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 MARCH9Q86YJ5 346 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 PALM2Q8IXS6 379 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 OR10G6Q8NH81 332 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 GSDMBQ8TAX9 411 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 SEC14L1Q92503 715 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 TBC1D10AQ9BXI6 508 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 PHACTR1Q9C0D0 580 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 OR52A5Q9H2C5 316 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 UCK1Q9HA47 277 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 HEBP2Q9Y5Z4 205 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 ZFHX4Q86UP3 3567 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 PRAMEF33A0A0G2JMD5 474 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 SLC5A10A0PJK1 596 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 E5RI56 91 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 KPNA5O15131 536 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 DUX1O43812 170 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 NIPSNAP2O75323 286 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 CSO75390 466 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 CCR7P32248 378 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 CD151P48509 253 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 EPHA4P54764 986 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 GPLD1P80108 840 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 HSPA14Q0VDF9 509 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 TARDBPQ13148 414 aaKnown RBP eCLIP19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 NKAIN2Q5VXU1 208 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 TRMT10BQ6PF06 316 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 USP53Q70EK8 1073 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 PDZD3Q86UT5 571 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 CACTIN-AS1Q8N1I8 211 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 DCBLD1Q8N8Z6 715 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 C2CD4AQ8NCU7 369 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 ASZ1Q8WWH4 475 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 BIRC8Q96P09 236 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 PLAC1Q9HBJ0 212 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 SLC40A1Q9NP59 571 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 MTRF1LQ9UGC7 380 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 ZMIZ1Q9ULJ6 1067 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 COLEC10Q9Y6Z7 277 aa19.21■□□□□ 0.67
SHKBP1-214ENST00000597396 CPNE6O95741 557 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 CHRM3P20309 590 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 AOAHP28039 575 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 CD1CP29017 333 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 GPR18Q14330 331 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 FRG1Q14331 258 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 PLCL1Q15111 1095 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 OTOAQ7RTW8 1153 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 PIM3Q86V86 326 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 CNTN4Q8IWV2 1026 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 KDF1Q8NAX2 398 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 IFT81Q8WYA0 676 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 FERD3LQ96RJ6 166 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 TMEM121BQ9BXQ6 578 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 FAM129AQ9BZQ8 928 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 EPB41L1Q9H4G0 881 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 L2HGDHQ9H9P8 463 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 RDH14Q9HBH5 336 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 ZDHHC18Q9NUE0 388 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 MSRB2Q9Y3D2 182 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 IGF2RP11717 2491 aa19.2■□□□□ 0.66
SHKBP1-214ENST00000597396 FRYQ5TBA9 3013 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 BHMG1C9JSJ3 638 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 HAUS5O94927 633 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 AMD1P17707 334 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 NDUFS1P28331 727 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 MAGEA4P43358 317 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 LEPRP48357 1165 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 MGAT5Q09328 741 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 CLPPQ16740 277 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 ISXQ2M1V0 245 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 TEDDM1Q5T9Z0 273 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 CNSTQ6PJW8 725 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 CCNI2Q6ZMN8 369 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 KIAA0408Q6ZU52 694 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 TFGQ92734 400 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 GATA6Q92908 595 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 FAM136AQ96C01 138 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 C9orf72Q96LT7 481 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 TMEM74Q96NL1 305 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 DPYSL5Q9BPU6 564 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 NUDT22Q9BRQ3 303 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 ZFATQ9P243 1243 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 SLC17A6Q9P2U8 582 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 COMMD10Q9Y6G5 202 aa19.19■□□□□ 0.66
SHKBP1-214ENST00000597396 FAM221BA6H8Z2 402 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 TMEM8BA6NDV4 472 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 GPC4O75487 556 aa19.18■□□□□ 0.66
SHKBP1-214ENST00000597396 UBXN7O94888 489 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms