RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 RASGRP3Q8IV61 690 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 PIANPQ8IYJ0 282 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 D2HGDHQ8N465 521 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 TAB3Q8N5C8 712 aaPredicted RBP17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 DNAAF3Q8N9W5 541 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 ACVR1CQ8NER5 493 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 C1orf54Q8WWF1 131 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 ADNPQ9H2P0 1102 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 PIH1D1Q9NWS0 290 aaKnown RBP17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 GEMIN8Q9NWZ8 242 aaKnown RBP17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 FAM8A1Q9UBU6 413 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 RPS6KL1Q9Y6S9 549 aa17.47■□□□□ 0.39
CHMP2A-203ENST00000597209 UBA6A0AVT1 1052 aaPredicted RBP17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 OR6C74A6NCV1 312 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 IFRD1O00458 451 aaPredicted RBP17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 KIAA0754O94854 1291 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 IFNB1P01574 187 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 CCDC175P0C221 793 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 PRSS56P0CW18 603 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 FOLR1P15328 257 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 ITGB6P18564 788 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 ADRA1DP25100 572 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 MSNP26038 577 aaKnown RBP17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 FOXN2P32314 431 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 HSD11B2P80365 405 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 KRT33BQ14525 404 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 SIX1Q15475 284 aaPredicted RBP17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 LYPLAL1Q5VWZ2 237 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 ARMC6Q6NXE6 501 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 PEX13Q92968 403 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 TFB2MQ9H5Q4 396 aaKnown RBP17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 MVB12BQ9H7P6 319 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 STARD5Q9NSY2 213 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 PAK5Q9P286 719 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 IL17BQ9UHF5 180 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 RARRES3Q9UL19 164 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 DRG1Q9Y295 367 aaKnown RBP17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 ZKSCAN5Q9Y2L8 839 aa17.46■□□□□ 0.39
CHMP2A-203ENST00000597209 E7EVH7 732 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 TERTO14746 1132 aaKnown RBP17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 LIN7AO14910 233 aaPredicted RBP17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 NKX2-8O15522 239 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 ZBTB11O95625 1053 aaPredicted RBP17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 FAM87AP0C7U9 286 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 LMAN1P49257 510 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 ARL4DP49703 201 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 ACVR1Q04771 509 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 PRKAA1Q13131 559 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 TUBB3Q13509 450 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 TSTD2Q5T7W7 516 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 PPP1R21Q6ZMI0 780 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 NLRP9Q7RTR0 991 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 UNC5BQ8IZJ1 945 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 CLDN19Q8N6F1 224 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 GALNT6Q8NCL4 622 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 OR13J1Q8NGT2 312 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 MAIP1Q8WWC4 291 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 STAMBPL1Q96FJ0 436 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 SGSM3Q96HU1 749 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 ELMO2Q96JJ3 720 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 FERD3LQ96RJ6 166 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 CASS4Q9NQ75 786 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 RAB6BQ9NRW1 208 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 SMARCAL1Q9NZC9 954 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 TUBD1Q9UJT1 453 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 BTRCQ9Y297 605 aa17.45■□□□□ 0.38
CHMP2A-203ENST00000597209 GCN1Q92616 2671 aaKnown RBP17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 CCDC162PA2VCL2 907 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 RECKO95980 971 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 FTH1P02794 183 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 CCNYL3P0C7X3 344 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 ETS1P14921 441 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 PDHA2P29803 388 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 CCR10P46092 362 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 KPNA2P52292 529 aaKnown RBP17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 PLOD1Q02809 727 aaPredicted RBP17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 CDC20Q12834 499 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 BOP1Q14137 746 aaKnown RBP17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 CCDC38Q502W7 563 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 CERS6Q6ZMG9 384 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 MICALCLQ6ZW33 695 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 LRRC8AQ8IWT6 810 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 CCDC89Q8N998 374 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 OR4E2Q8NGC2 313 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 OR8K5Q8NH50 307 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 LCN9Q8WX39 176 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 STARD8Q92502 1023 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.44■□□□□ 0.382e-6■■■■■ 27.5
CHMP2A-203ENST00000597209 TTC1Q99614 292 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 SRMSQ9H3Y6 488 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 C1GALT1Q9NS00 363 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 FGF21Q9NSA1 209 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 POMT2Q9UKY4 750 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 PADI1Q9ULC6 663 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 PCDHGA6Q9Y5G7 932 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 PIEZO2Q9H5I5 2752 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 ZNF462Q96JM2 2506 aa17.44■□□□□ 0.38
CHMP2A-203ENST00000597209 J3QKU1 62 aa17.43■□□□□ 0.38
CHMP2A-203ENST00000597209 EBLN1P0CF75 366 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms