RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CFAP46Q8IYW2 2715 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 IGHV5-51A0A0C4DH38 117 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 GOLGA6L3A6NEY3 463 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 TLCD2A6NGC4 264 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 F8W8V4 182 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 IFRD1O00458 451 aaPredicted RBP10.25□□□□□ -0.77
CCDC9-203ENST00000596938 LIN7AO14910 233 aaPredicted RBP10.25□□□□□ -0.77
CCDC9-203ENST00000596938 C1QL1O75973 258 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 DLGAP3O95886 979 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 FOXN2P32314 431 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 PPARGP37231 505 aaPredicted RBP10.25□□□□□ -0.77
CCDC9-203ENST00000596938 NPY2RP49146 381 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 SH3BP2P78314 561 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 CDK16Q00536 496 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 PLOD1Q02809 727 aaPredicted RBP10.25□□□□□ -0.77
CCDC9-203ENST00000596938 FOXM1Q08050 763 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 LINC00303Q3SY05 128 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC9-203ENST00000596938 PCID2Q5JVF3 399 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 GSTA5Q7RTV2 222 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 OOSP2Q86WS3 158 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF843Q8N446 348 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 ESX1Q8N693 406 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 OR4L1Q8NH43 312 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC9-203ENST00000596938 SLC45A3Q96JT2 553 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF778Q96MU6 729 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 FERD3LQ96RJ6 166 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 EFHD1Q9BUP0 239 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 TFB2MQ9H5Q4 396 aaKnown RBP10.25□□□□□ -0.77
CCDC9-203ENST00000596938 MVB12BQ9H7P6 319 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 FAM8A1Q9UBU6 413 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 SLC2A6Q9UGQ3 507 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 JRKLQ9Y4A0 524 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 TCAF1Q9Y4C2 921 aa10.25□□□□□ -0.77
CCDC9-203ENST00000596938 UBA6A0AVT1 1052 aaPredicted RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 CCDC78A2IDD5 438 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 OR6C74A6NCV1 312 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 OR51F1A6NGY5 319 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 MATN2O00339 956 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 SPAG6O75602 509 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 ZBTB11O95625 1053 aaPredicted RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 GOT2P00505 430 aaKnown RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 FTH1P02794 183 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PRB1P04280 392 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 OR56A5P0C7T3 313 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 LIFP15018 202 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 FOLR1P15328 257 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PDHA2P29803 388 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 CXCR5P32302 372 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 KCNJ1P48048 391 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PPP1CAP62136 330 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 HSD11B2P80365 405 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 ACY1Q03154 408 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 BOP1Q14137 746 aaKnown RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 TBR1Q16650 682 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 DNTTIP2Q5QJE6 756 aaKnown RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 ARMC6Q6NXE6 501 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 DUS1LQ6P1R4 473 aaKnown RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 AFTPHQ6ULP2 937 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 C6orf15Q6UXA7 325 aaPredicted RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 MICALCLQ6ZW33 695 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF534Q76KX8 674 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PPP1R3BQ86XI6 285 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 RASGEF1CQ8N431 466 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 D2HGDHQ8N465 521 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PRELID2Q8N945 189 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 SIDT2Q8NBJ9 832 aaKnown RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PHC3Q8NDX5 983 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PPHLN1Q8NEY8 458 aaKnown RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 OR4E2Q8NGC2 313 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 OR6P1Q8NGX9 317 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 LCN9Q8WX39 176 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 TFGQ92734 400 aaPredicted RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 KIAA1143Q96AT1 154 aaPredicted RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 MED8Q96G25 268 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PBKQ96KB5 322 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 MAP3K3Q99759 626 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 ULBP3Q9BZM4 244 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 IL22Q9GZX6 179 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 SRMSQ9H3Y6 488 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PDE7BQ9NP56 450 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 CHRAC1Q9NRG0 131 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 C1GALT1Q9NS00 363 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 TTC7AQ9ULT0 858 aaPredicted RBP10.24□□□□□ -0.77
CCDC9-203ENST00000596938 PRSS21Q9Y6M0 314 aa10.24□□□□□ -0.77
CCDC9-203ENST00000596938 SCN8AQ9UQD0 1980 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 LOC101059948A0A1B0GTJ6 334 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 SLC5A10A0PJK1 596 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
CCDC9-203ENST00000596938 OR1I1O60431 355 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 SFTPCP11686 197 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 ZNF28P17035 718 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 ACADLP28330 430 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 STAT5AP42229 794 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 ARL4DP49703 201 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 CYP4F2P78329 520 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 PRAMEP78395 509 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 PRKAA1Q13131 559 aa10.23□□□□□ -0.77
CCDC9-203ENST00000596938 LY6DQ14210 128 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms