RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 SKA1Q96BD8 255 aa22.54■■□□□ 1.2
SPTBN4-210ENST00000596900 MBNL1Q9NR56 388 aaKnown RBP22.54■■□□□ 1.2
SPTBN4-210ENST00000596900 FBXL21Q9UKT6 434 aa22.54■■□□□ 1.2
SPTBN4-210ENST00000596900 LRRC72A6NJI9 287 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 LILRB5O75023 590 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 PBLDP30039 288 aaPredicted RBP22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 IDH3AP50213 366 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 EPGNQ6UW88 154 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 Q6ZS52 159 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 MAVSQ7Z434 540 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 VRK3Q8IV63 474 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 TCAIMQ8N3R3 496 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 ZNF483Q8TF39 744 aaPredicted RBP22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 HMGB4Q8WW32 186 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 KLK6Q92876 244 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 FOPNLQ96NB1 174 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 EBF4Q9BQW3 602 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 LMAN1LQ9HAT1 526 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 WWOXQ9NZC7 414 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 PCTPQ9UKL6 214 aa22.53■■□□□ 1.2
SPTBN4-210ENST00000596900 TMEM202A6NGA9 273 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 AP1S2P56377 157 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 ZP2Q05996 745 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 PGBD3Q8N328 593 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 OR2T34Q8NGX1 318 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 HM13Q8TCT9 377 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 MCOLN3Q8TDD5 553 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 DLG3Q92796 817 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 NELL2Q99435 816 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 MYLK2Q9H1R3 596 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 SGK2Q9HBY8 427 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 ARL15Q9NXU5 204 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 PTBP2Q9UKA9 531 aaKnown RBP22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 STK38LQ9Y2H1 464 aa22.52■■□□□ 1.2
SPTBN4-210ENST00000596900 KLHL33A6NCF5 533 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 LRRC14BA6NHZ5 514 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 H3BM21 787 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 GFYI3L273 518 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 CHUKO15111 745 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 MYCLP1P12525 358 aaPredicted RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 AGTR2P50052 363 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 LACTB2Q53H82 288 aaPredicted RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 DOK6Q6PKX4 331 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 LRRTM4Q86VH4 590 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 TRIM69Q86WT6 500 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 SLC22A15Q8IZD6 547 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 DENND6BQ8NEG7 585 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 FLCNQ8NFG4 579 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 OR56A4Q8NGH8 313 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 OR2L2Q8NH16 312 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 TRPC4APQ8TEL6 797 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 HGH1Q9BTY7 390 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 MID1IP1Q9NPA3 183 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 SEMA4BQ9NPR2 832 aaPredicted RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 ITM2CQ9NQX7 267 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 EIF2B4Q9UI10 523 aaKnown RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 DNMT3AQ9Y6K1 912 aaPredicted RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 E2F3O00716 465 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 UBOX5O94941 541 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 MATN4O95460 622 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 TSPAN8P19075 237 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 TARSP26639 723 aaKnown RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 MAP4P27816 1152 aaKnown RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 MAT2AP31153 395 aaKnown RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 HNMTP50135 292 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 UBXN2BQ14CS0 331 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 CRTC3Q6UUV7 619 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 ACAD11Q709F0 780 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 CLNKQ7Z7G1 428 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 CLYBLQ8N0X4 340 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 RHBDF1Q96CC6 855 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 NSUN5Q96P11 429 aaKnown RBP22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 PDE10AQ9Y233 779 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 TMEM98Q9Y2Y6 226 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 TRAF6Q9Y4K3 522 aa22.51■■□□□ 1.19
SPTBN4-210ENST00000596900 MGAT4DA6NG13 374 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 UBFD1O14562 309 aaKnown RBP22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 GRID2O43424 1007 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 POP7O75817 140 aaKnown RBP22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 CATP04040 527 aaKnown RBP22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 SERPINA6P08185 405 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 FGF4P08620 206 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 STARD6P59095 220 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 NUMA1Q14980 2115 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 FBXO48Q5FWF7 155 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 TTC23LQ6PF05 361 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 ALYREFQ86V81 257 aaKnown RBP22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 ZNF547Q8IVP9 402 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 CFAP206Q8IYR0 622 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 ZNF687Q8N1G0 1237 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 UBTD2Q8WUN7 234 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 FOXJ1Q92949 421 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 LGR4Q9BXB1 951 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 NUF2Q9BZD4 464 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 LTB4R2Q9NPC1 389 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 TCF7L2Q9NQB0 619 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 USP36Q9P275 1121 aaKnown RBP22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 OR1A2Q9Y585 309 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 DOCK9Q9BZ29 2069 aa22.5■■□□□ 1.19
SPTBN4-210ENST00000596900 KANSL1LA0AUZ9 987 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms