RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 GOLGA8CPA6NN73 597 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 E5RI56 91 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 BTN3A1O00481 513 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 ZNF821O75541 412 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 HLA-FP30511 346 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TMBIM6P55061 237 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 NFKB2Q00653 900 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 CD300CQ08708 224 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TRIM25Q14258 630 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TEAD2Q15562 447 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 GEN1Q17RS7 908 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 SPRED2Q7Z698 418 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 RAB44Q7Z6P3 723 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TMEM25Q86YD3 366 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 STAG3L4Q8TBR4 150 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 KIAA1191Q96A73 305 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 MAELQ96JY0 434 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 DERL2Q9GZP9 239 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 ZNF385DQ9H6B1 395 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 ZFYVE1Q9HBF4 777 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TRMT6Q9UJA5 497 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 NOX1Q9Y5S8 564 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 OAS3Q9Y6K5 1087 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 ATP6AP2A0A1C7CYW4 349 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 TLL1O43897 1013 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 ATP6AP2O75787 350 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 CLDN7O95471 211 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 CCNA2P20248 432 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 NME5P56597 212 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 SH3BP2P78314 561 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 C6orf183Q5T699 404 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 AGAP7PQ5VUJ5 663 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 TMEM26Q6ZUK4 368 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 IGFN1Q86VF2 1251 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 MRPL43Q8N983 215 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 EEF1AKMT1Q8WVE0 214 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 POF1BQ8WVV4 589 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 FAR2Q96K12 515 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 TRMOQ9BU70 441 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 A0A0J9YYE9 177 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 NEDD8-MDP1E9PL57 170 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 H7C0S8 307 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 KERAO60938 352 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 ECI2O75521 394 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 PRAMEF1O95521 474 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 TRBC1P01850 177 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 BMP2P12643 396 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 HNF1BP35680 557 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 MTX3Q5HYI7 312 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 PITRM1Q5JRX3 1037 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 YTHDF1Q9BYJ9 559 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 ATP13A3Q9H7F0 1226 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 MID1IP1Q9NPA3 183 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 PRKAG2Q9UGJ0 569 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 DAPK2Q9UIK4 370 aa16.8■□□□□ 0.28
SHKBP1-205ENST00000594973 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 TCRBV3S1A0A5B6 114 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 CLPXO76031 633 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 IGSF6O95976 241 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 EEF1DP29692 281 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 CCT8P50990 548 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 CLCN4P51793 760 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 FPGSQ05932 587 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 CACNG1Q06432 222 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 GALNT1Q10472 559 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 PTK2BQ14289 1009 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 FUT11Q495W5 492 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 ZSWIM9Q86XI8 627 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 FBXO39Q8N4B4 442 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 RNF148Q8N7C7 305 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 OR2AP1Q8NGE2 309 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 CD200R1Q8TD46 325 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 LINGO1Q96FE5 620 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 ALPK1Q96QP1 1244 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 ZNF347Q96SE7 839 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 NDEL1Q9GZM8 345 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 MEAF6Q9HAF1 191 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 ZBTB26Q9HCK0 441 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 IFT52Q9Y366 437 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 SNX13Q9Y5W8 968 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 RSL1D1O76021 490 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 BCL10O95999 233 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 SRCP12931 536 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 CA5AP35218 305 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 BMPR1AP36894 532 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 PTGER3P43115 390 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 ATP6V0D1P61421 351 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 NKAPQ8N5F7 415 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 FUBP1Q96AE4 644 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 RAD9AQ99638 391 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 CIB1Q99828 191 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 TMEM106CQ9BVX2 250 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 EHD1Q9H4M9 534 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 POLR1BQ9H9Y6 1135 aa16.79■□□□□ 0.28
SHKBP1-205ENST00000594973 MYOFQ9NZM1 2061 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 CDK14O94921 469 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 TSPAN12O95859 305 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 MAP4P27816 1152 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 FOXA1P55317 472 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 IL2P60568 153 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms