RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CTBP1Q13363 440 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 GPR18Q14330 331 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 CTSL3PQ5NE16 218 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 HP1BP3Q5SSJ5 553 aaPredicted RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 KLHL35Q6PF15 583 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 ZNF761Q86XN6 746 aaPredicted RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 DENND6AQ8IWF6 608 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 ZBED8Q8IZ13 594 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 C2CD4AQ8NCU7 369 aaPredicted RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 SPDYE1Q8NFV5 336 aaPredicted RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 OR4D9Q8NGE8 314 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 GSDMBQ8TAX9 411 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 FBXO25Q8TCJ0 367 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 CFAP36Q96G28 342 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 WDR83Q9BRX9 315 aaKnown RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 CCDC68Q9H2F9 335 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 LATS2Q9NRM7 1088 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 IARS2Q9NSE4 1012 aaKnown RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 ATXN7L1Q9ULK2 861 aaPredicted RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 BHMG1C9JSJ3 638 aaPredicted RBP25.15■■□□□ 1.62
TRIM28-204ENST00000594806 GPC4O75487 556 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 ERVK-10P10266 1014 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 PREPP48147 710 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 LEPRP48357 1165 aaKnown RBP25.15■■□□□ 1.62
TRIM28-204ENST00000594806 TRA2AQ13595 282 aaKnown RBP eCLIP25.15■■□□□ 1.62
TRIM28-204ENST00000594806 KRT33BQ14525 404 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 PLEKHS1Q5SXH7 462 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 TMEM71Q6P5X7 295 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 CEP128Q6ZU80 1094 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 USP53Q70EK8 1073 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 OTOAQ7RTW8 1153 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 ANKMY2Q8IV38 441 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 SLC22A15Q8IZD6 547 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 NOA1Q8NC60 698 aaKnown RBP25.15■■□□□ 1.62
TRIM28-204ENST00000594806 TFGQ92734 400 aaPredicted RBP25.15■■□□□ 1.62
TRIM28-204ENST00000594806 LIN37Q96GY3 246 aaPredicted RBP25.15■■□□□ 1.62
TRIM28-204ENST00000594806 KIR3DX1Q9H7L2 352 aa25.15■■□□□ 1.62
TRIM28-204ENST00000594806 IQCF5A8MTL0 148 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 UBXN7O94888 489 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 SLCO2B1O94956 709 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 GSTA2P09210 222 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 ITGB6P18564 788 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 ACADLP28330 430 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 PPM1FP49593 454 aaPredicted RBP25.14■■□□□ 1.62
TRIM28-204ENST00000594806 PDX1P52945 283 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 GUCY2DQ02846 1103 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 HSPA14Q0VDF9 509 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 ZDHHC24Q6UX98 284 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 PLXDC1Q8IUK5 500 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 SLITRK4Q8IW52 837 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 PALM2Q8IXS6 379 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 UNC5BQ8IZJ1 945 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 KRT222Q8N1A0 295 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 GATA6Q92908 595 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 TBC1D10AQ9BXI6 508 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 PLAC1Q9HBJ0 212 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 SAYSD1Q9NPB0 183 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 PPANQ9NQ55 473 aaKnown RBP25.14■■□□□ 1.62
TRIM28-204ENST00000594806 PDP2Q9P2J9 529 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 KLHL42Q9P2K6 505 aa25.14■■□□□ 1.62
TRIM28-204ENST00000594806 CFAP20Q9Y6A4 193 aaKnown RBP25.14■■□□□ 1.62
TRIM28-204ENST00000594806 TRABD2BA6NFA1 517 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 CASC3O15234 703 aaKnown RBP25.13■■□□□ 1.61
TRIM28-204ENST00000594806 PROS1P07225 676 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 AMD1P17707 334 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 LIMK2P53671 638 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 ILF2Q12905 390 aaKnown RBP25.13■■□□□ 1.61
TRIM28-204ENST00000594806 FASTKD3Q14CZ7 662 aaKnown RBP25.13■■□□□ 1.61
TRIM28-204ENST00000594806 RTP5Q14D33 572 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 BRD3Q15059 726 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 NKAIN2Q5VXU1 208 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 CYS1Q717R9 158 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 ACVR1CQ8NER5 493 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 LKAAEAR1Q8TD35 194 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 NXPE2Q96DL1 559 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 FERD3LQ96RJ6 166 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 NUDT22Q9BRQ3 303 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 RAB33BQ9H082 229 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 TSPYL1Q9H0U9 437 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 RDH14Q9HBH5 336 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 FBXO6Q9NRD1 293 aaPredicted RBP25.13■■□□□ 1.61
TRIM28-204ENST00000594806 MOCS1Q9NZB8 636 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 SLC24A2Q9UI40 661 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 CDYLQ9Y232 598 aa25.13■■□□□ 1.61
TRIM28-204ENST00000594806 CCDC187A0A096LP49 1063 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 E5RI56 91 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 ZNF500O60304 480 aaPredicted RBP25.12■■□□□ 1.61
TRIM28-204ENST00000594806 CHRM3P20309 590 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 CARSP49589 748 aaKnown RBP25.12■■□□□ 1.61
TRIM28-204ENST00000594806 TRADDQ15628 312 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 ZNF789Q5FWF6 425 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 TEDDM1Q5T9Z0 273 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 MARCH9Q86YJ5 346 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 TBC1D21Q8IYX1 336 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 WDR36Q8NI36 951 aaKnown RBP25.12■■□□□ 1.61
TRIM28-204ENST00000594806 NCSTNQ92542 709 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 KCNJ9Q92806 393 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 ATXN7L3BQ96GX2 97 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 ZMYND15Q9H091 742 aa25.12■■□□□ 1.61
TRIM28-204ENST00000594806 NSMCE4AQ9NXX6 385 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms