RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 GABPB2Q8TAK5 448 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 SKA2Q8WVK7 121 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 ZFPM2Q8WW38 1151 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 KCNE4Q8WWG9 221 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 LCN9Q8WX39 176 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 TFGQ92734 400 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 USP7Q93009 1102 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 TRIM44Q96DX7 344 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 RMDN2Q96LZ7 410 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 SERPINB12Q96P63 405 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PANX3Q96QZ0 392 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 TAAR9Q96RI9 348 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 KRT12Q99456 494 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 TRIM31Q9BZY9 425 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 MVB12BQ9H7P6 319 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 KCND1Q9NSA2 647 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 TREX1Q9NSU2 369 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 SLC39A1Q9NY26 324 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 MARCH4Q9P2E8 410 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 GNPTGQ9UJJ9 305 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 NEU2Q9Y3R4 380 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PCDHB11Q9Y5F2 797 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 RPS6KL1Q9Y6S9 549 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 LAMA5O15230 3695 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 ARHGEF17Q96PE2 2063 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 PMS2P1A4D2B8 440 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 OR6C74A6NCV1 312 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 EFCAB8A8MWE9 144 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 GOLGA8KD6RF30 607 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 GOLGA8TH3BQL2 631 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 SMAPO00193 183 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 NDC80O14777 642 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 KPNA5O15131 536 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 KDM1AO60341 852 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 THRAP10827 490 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CCL4P13236 92 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 FMO4P31512 558 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 EIF2S3P41091 472 aaKnown RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 PTGIRP43119 386 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 ABCG1P45844 678 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CD151P48509 253 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 SEPHS1P49903 392 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 EIF3BP55884 814 aaKnown RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CFHR1Q03591 330 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 FOXM1Q08050 763 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 HSPA14Q0VDF9 509 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 PRKG2Q13237 762 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 LONRF1Q17RB8 773 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 BBS9Q3SYG4 887 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 ANKRD20A4Q4UJ75 823 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 RNF187Q5TA31 235 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 RNASEH2BQ5TBB1 312 aaKnown RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CACHD1Q5VU97 1274 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 KIAA0930Q6ICG6 404 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CAPRIN2Q6IMN6 1127 aaKnown RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 NEPROQ6NW34 567 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 TTC23LQ6PF05 361 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 IGF2-ASQ6U949 168 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 NAPRTQ6XQN6 538 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 FAM92BQ6ZTR7 304 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 HOOK3Q86VS8 718 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 LRRC6Q86X45 466 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 PDIK1LQ8N165 341 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 KRT222Q8N1A0 295 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 OR4E2Q8NGC2 313 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 GPR150Q8NGU9 434 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CFAP61Q8NHU2 1237 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 SNIP1Q8TAD8 396 aaKnown RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 ASZ1Q8WWH4 475 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 ZNF592Q92610 1267 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 SLCO2A1Q92959 643 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 ART4Q93070 314 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 STAMBPL1Q96FJ0 436 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 TCF12Q99081 682 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CARD6Q9BX69 1037 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 CCDC68Q9H2F9 335 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 TRIT1Q9H3H1 467 aaKnown RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 SRMSQ9H3Y6 488 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 ASCL3Q9NQ33 180 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 C20orf96Q9NUD7 363 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 HRASLS2Q9NWW9 162 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 SLC24A2Q9UI40 661 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 ASF1AQ9Y294 204 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 VPS9D1Q9Y2B5 631 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 TDRKHQ9Y2W6 561 aaKnown RBP9.83□□□□□ -0.84
BRCA1-227ENST00000591849 PCDHGA7Q9Y5G6 932 aa9.83□□□□□ -0.84
BRCA1-227ENST00000591849 MYLKQ15746 1914 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 UNC13CQ8NB66 2214 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 A0A1W2PNU3 283 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 GSAPA4D1B5 854 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 IQCF5A8MTL0 148 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 B4E171 279 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 E5RI56 91 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 H3BMM5 538 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 NVLO15381 856 aaKnown RBP9.82□□□□□ -0.84
BRCA1-227ENST00000591849 TTI1O43156 1089 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 KLK10O43240 276 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 MAP3K7O43318 606 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 CHRM3P20309 590 aa9.82□□□□□ -0.84
BRCA1-227ENST00000591849 OGNP20774 298 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms