RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 WASH6PQ9NQA3 447 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 BFARQ9NZS9 450 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 FAM8A1Q9UBU6 413 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 RIMKLBQ9ULI2 386 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 SATB2Q9UPW6 733 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 TCAF1Q9Y4C2 921 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 IGHV1OR21-1A0A087WYE8 117 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 TRBV5-4A0A0C4DH59 114 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 CCDC162PA2VCL2 907 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 MGAT4DA6NG13 374 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 OR51F1A6NGY5 319 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 DUX1O43812 170 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 CAPNS1P04632 268 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 XRCC1P18887 633 aaPredicted RBP10.16□□□□□ -0.78
SDF2-208ENST00000589788 PSMA3P25788 255 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 CD1CP29017 333 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 RBMS1P29558 406 aaKnown RBP10.16□□□□□ -0.78
SDF2-208ENST00000589788 CCKBRP32239 447 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 MAPK9P45984 424 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 FNTAP49354 379 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 CDKN1CP49918 316 aaPredicted RBP10.16□□□□□ -0.78
SDF2-208ENST00000589788 PDX1P52945 283 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 DMPKQ09013 629 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 EIF3IQ13347 325 aaKnown RBP10.16□□□□□ -0.78
SDF2-208ENST00000589788 NFE2L1Q14494 772 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 PPP1R7Q15435 360 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 KIF26BQ2KJY2 2108 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 BCL7AQ4VC05 210 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 PCID2Q5JVF3 399 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 LYPLAL1Q5VWZ2 237 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 NKAIN2Q5VXU1 208 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 ABRAXAS1Q6UWZ7 409 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 RAB11FIP2Q7L804 512 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 BEND7Q8N7W2 519 aaPredicted RBP10.16□□□□□ -0.78
SDF2-208ENST00000589788 SPATA4Q8NEY3 305 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 OR13J1Q8NGT2 312 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 OR6P1Q8NGX9 317 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 OR2L2Q8NH16 312 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 HDAC10Q969S8 669 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 LIN37Q96GY3 246 aaPredicted RBP10.16□□□□□ -0.78
SDF2-208ENST00000589788 DPYSL5Q9BPU6 564 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 NUDT22Q9BRQ3 303 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 CARD6Q9BX69 1037 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 IL22Q9GZX6 179 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 AKAP7Q9P0M2 348 aaPredicted RBP10.16□□□□□ -0.78
SDF2-208ENST00000589788 VTI1BQ9UEU0 232 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 SLC2A6Q9UGQ3 507 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 PSMD13Q9UNM6 376 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 ACACAQ13085 2346 aa10.16□□□□□ -0.78
SDF2-208ENST00000589788 EPG5Q9HCE0 2579 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 IGLV3-16A0A075B6K0 115 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CTAGE15A4D2H0 777 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 PRR19A6NJB7 356 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 OR52A4PA6NMU1 304 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 SRRM3A6NNA2 597 aaPredicted RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 PLD2O14939 933 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 SLU7O95391 586 aaKnown RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 GOT2P00505 430 aaKnown RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 SLC35G4P0C7Q5 338 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 JMJD7P0C870 316 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CTAGE8P0CG41 777 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 PRSS56P0CW18 603 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 BRAFP15056 766 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 MGAT1P26572 445 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 FOXN2P32314 431 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 PPARGP37231 505 aaPredicted RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 PRLHRP49683 370 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 UBE2IP63279 158 aaKnown RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 CRADDP78560 199 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 ZFP36L1Q07352 338 aaKnown RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 ITIH4Q14624 930 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 KCNJ11Q14654 390 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 KCTD19Q17RG1 926 aaPredicted RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 FASTKD1Q53R41 847 aaKnown RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 METRNLQ641Q3 311 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 LRRC8BQ6P9F7 803 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 ZNF449Q6P9G9 518 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CERS6Q6ZMG9 384 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 FAM83HQ6ZRV2 1179 aaPredicted RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 MICALCLQ6ZW33 695 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CTAGE6Q86UF2 777 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CTAGE4Q8IX94 777 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 RBM12BQ8IXT5 1001 aaKnown RBP10.15□□□□□ -0.78
SDF2-208ENST00000589788 PIANPQ8IYJ0 282 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 FBXO39Q8N4B4 442 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 OR4L1Q8NH43 312 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 NAT14Q8WUY8 206 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 NCSTNQ92542 709 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 PEX13Q92968 403 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 TMEM159Q96B96 161 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 ZNF778Q96MU6 729 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 FRMD6Q96NE9 622 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CMKLR1Q99788 373 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CCM2Q9BSQ5 444 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 SEMA6CQ9H3T2 930 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 EPB41L1Q9H4G0 881 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 CHRAC1Q9NRG0 131 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 THSD1Q9NS62 852 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 POT1Q9NUX5 634 aa10.15□□□□□ -0.78
SDF2-208ENST00000589788 ZNF624Q9P2J8 865 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms