RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PFKFB4Q16877 469 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 GCNT7Q6ZNI0 430 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 C11orf96Q7Z7L8 435 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 FBXO39Q8N4B4 442 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 CCNYL1Q8N7R7 359 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 SNX19Q92543 992 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 ATOH1Q92858 354 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 BMFQ96LC9 184 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 PCED1AQ9H1Q7 454 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 EBF2Q9HAK2 575 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 UTP6Q9NYH9 597 aaKnown RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 NUDT4Q9NZJ9 180 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 MOSPD1Q9UJG1 213 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 ADAMTS6Q9UKP5 1117 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 EML5Q05BV3 1969 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 KLHL33A6NCF5 533 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 H0Y8X5 98 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 K7ESF4 209 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 SNNO75324 88 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-209ENST00000588857 ABCE1P61221 599 aaKnown RBP21.81■■□□□ 1.08
ATG4D-209ENST00000588857 YPEL5P62699 121 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 TGFBIQ15582 683 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 ZNF658BQ4V348 819 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-209ENST00000588857 USP39Q53GS9 565 aaKnown RBP21.81■■□□□ 1.08
ATG4D-209ENST00000588857 CES4AQ5XG92 561 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 SLC22A15Q8IZD6 547 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 PTGR2Q8N8N7 351 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-209ENST00000588857 TMEM145Q8NBT3 493 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 OR6Y1Q8NGX8 325 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 C7orf26Q96N11 449 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 TRIM54Q9BYV2 358 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 COG4Q9H9E3 785 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-209ENST00000588857 INVSQ9Y283 1065 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 OARD1Q9Y530 152 aa21.81■■□□□ 1.08
ATG4D-209ENST00000588857 PABPN1LA6NDY0 278 aaKnown RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 NCF1BA6NI72 391 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 NCF1CA8MVU1 366 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 H3BM21 787 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 NCF1P14598 390 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 IMPDH1P20839 514 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 MAPK9P45984 424 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 THOP1P52888 689 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 PFN3P60673 137 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 SP140Q13342 867 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 UBE2R2Q712K3 238 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 GALNT13Q8IUC8 556 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 OXR1Q8N573 874 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 LILRA3Q8N6C8 439 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 PPP4R1Q8TF05 950 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 ASB11Q8WXH4 323 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 GRAMD1AQ96CP6 724 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 GULP1Q9UBP9 304 aa21.8■■□□□ 1.08
ATG4D-209ENST00000588857 PCYT1BQ9Y5K3 369 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 ZFC3H1O60293 1989 aaKnown RBP21.8■■□□□ 1.08
ATG4D-209ENST00000588857 CACNA1IQ9P0X4 2223 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 A0A1W2PPC4 97 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 SLC16A5O15375 505 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 HSPA4LO95757 839 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 VCLP18206 1134 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 HK3P52790 923 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 ALDH18A1P54886 795 aaKnown RBP21.79■■□□□ 1.08
ATG4D-209ENST00000588857 HERVK_113P63132 956 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 OCRLQ01968 901 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 ABRQ12979 859 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 RCN2Q14257 317 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 NFE2L1Q14494 772 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 PPP1R3AQ16821 1122 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 CADM4Q8NFZ8 388 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 OR56A4Q8NGH8 313 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 ZNF473Q8WTR7 871 aaKnown RBP21.79■■□□□ 1.08
ATG4D-209ENST00000588857 L3HYPDHQ96EM0 354 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 WDR92Q96MX6 357 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 FOPNLQ96NB1 174 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 TMEM237Q96Q45 408 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 ERVK-6Q9BXR3 956 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 ZNF395Q9H8N7 513 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-209ENST00000588857 RDH14Q9HBH5 336 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 PARVBQ9HBI1 364 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 FAM86C1Q9NVL1 165 aa21.79■■□□□ 1.08
ATG4D-209ENST00000588857 FFAR2O15552 330 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 MAP3K13O43283 966 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 KLK8O60259 260 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 MATN4O95460 622 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 ENO2P09104 434 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 HIST1H2AGP0C0S8 130 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 HIST1H2ADP20671 130 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 PDHA2P29803 388 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 SERPINB5P36952 375 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 RABIFP47224 123 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 RPL6Q02878 288 aaKnown RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 RPA4Q13156 261 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 PHKG1Q16816 387 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 ENPP7Q6UWV6 458 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 SLC36A4Q6YBV0 504 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 Q6ZSR6 202 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 CHST15Q7LFX5 561 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-209ENST00000588857 CRLF3Q8IUI8 442 aa21.78■■□□□ 1.08
ATG4D-209ENST00000588857 HIST1H2AHQ96KK5 128 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms