RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SF3A2Q15428 464 aaKnown RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 PRAMEF14Q5SWL7 426 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 GPRC6AQ5T6X5 926 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 GKAP1Q5VSY0 366 aaPredicted RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 ZNF549Q6P9A3 640 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 TTC23LQ6PF05 361 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 ZYG11AQ6WRX3 759 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 NEK10Q6ZWH5 1172 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 ADGRG6Q86SQ4 1221 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 NUDCD3Q8IVD9 361 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 CENPLQ8N0S6 344 aaPredicted RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 CHCHD4Q8N4Q1 142 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 OR2I1PQ8NGU4 316 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 PPP1R14CQ8TAE6 165 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 CEP76Q8TAP6 659 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 STAG3L4Q8TBR4 150 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 MGARPQ8TDB4 240 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 STON2Q8WXE9 905 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 SCARF2Q96GP6 870 aaPredicted RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 HIC2Q96JB3 615 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 C7orf26Q96N11 449 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 ZNF317Q96PQ6 595 aaPredicted RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 TCEAL2Q9H3H9 227 aaPredicted RBP12.42□□□□□ -0.42
VMP1-202ENST00000585847 WDR26Q9H7D7 661 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 MANSC1Q9H8J5 431 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 FGF22Q9HCT0 170 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 RXFP3Q9NSD7 469 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 SLC6A14Q9UN76 642 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 TMEM98Q9Y2Y6 226 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 DHRS7Q9Y394 339 aa12.42□□□□□ -0.42
VMP1-202ENST00000585847 NDUFAB1O14561 156 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 PHGDHO43175 533 aaKnown RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 SGTAO43765 313 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 KCNJ13O60928 360 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 DNAJC6O75061 913 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ENO2P09104 434 aaPredicted RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 CCDC166P0CW27 439 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ATP1B2P14415 290 aaPredicted RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 CHRM3P20309 590 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 MSH3P20585 1137 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 AKT1P31749 480 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 GYS2P54840 703 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 CDKN2DP55273 166 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 GTF2H3Q13889 308 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 ZNF423Q2M1K9 1284 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 BCL7AQ4VC05 210 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 CTSL3PQ5NE16 218 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 PLEKHS1Q5SXH7 462 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 RBM20Q5T481 1227 aaKnown RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 LIPMQ5VYY2 423 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ENPP7Q6UWV6 458 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 CPLX4Q7Z7G2 160 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 CEP97Q8IW35 865 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ANKS4BQ8N8V4 417 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ARMC2Q8NEN0 867 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 CD200R1Q8TD46 325 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 NAT14Q8WUY8 206 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 OR1E3Q8WZA6 343 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 KIAA1191Q96A73 305 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 NDNQ99608 321 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 OLFM1Q99784 485 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 PAIP2Q9BPZ3 127 aaKnown RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 CAB39LQ9H9S4 337 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 IL21RQ9HBE5 538 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 MRPL40Q9NQ50 206 aaKnown RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 PHPT1Q9NRX4 125 aaPredicted RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 THAP1Q9NVV9 213 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 NCKIPSDQ9NZQ3 722 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 SLC17A7Q9P2U7 560 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ATXN10Q9UBB4 475 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 GPR34Q9UPC5 381 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 SLC17A4Q9Y2C5 497 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 STK38LQ9Y2H1 464 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 ARID1BQ8NFD5 2236 aaPredicted RBP12.41□□□□□ -0.42
VMP1-202ENST00000585847 CABIN1Q9Y6J0 2220 aa12.41□□□□□ -0.42
VMP1-202ENST00000585847 USP24Q9UPU5 2620 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 LNP1A1A4G5 178 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 ARHGAP33O14559 1287 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 TRIM13O60858 407 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 KERAO60938 352 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 SMIM24O75264 130 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 CFIP05156 583 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 F7P08709 466 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 TPBGLP0DKB5 382 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
VMP1-202ENST00000585847 ZNF8P17098 575 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 ENGP17813 658 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 SAT1P21673 171 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 FMO4P31512 558 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 CLCN7P51798 805 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 LIMK1P53667 647 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 GALNT1Q10472 559 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 TEAD4Q15561 434 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 ZNF789Q5FWF6 425 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 TECRLQ5HYJ1 363 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 CDHR3Q6ZTQ4 885 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms