RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 C9orf72Q96LT7 481 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 CCM2Q9BSQ5 444 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 RAB33BQ9H082 229 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 WWP1Q9H0M0 922 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 GEMIN8Q9NWZ8 242 aaKnown RBP17.42■□□□□ 0.38
ERBB2-221ENST00000584888 SMARCAL1Q9NZC9 954 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 EPHA6Q9UF33 1036 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 SNX12Q9UMY4 172 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 PRSS21Q9Y6M0 314 aa17.42■□□□□ 0.38
ERBB2-221ENST00000584888 FLNBO75369 2602 aaKnown RBP17.42■□□□□ 0.38
ERBB2-221ENST00000584888 USP27XA6NNY8 438 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 POLR1CO15160 346 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 STK17BO94768 372 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 AP2A2O94973 939 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 GOT2P00505 430 aaKnown RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 ANKRD34CP0C6C1 535 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 MTHFD1P11586 935 aaKnown RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 GFERP55789 205 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 BASP1P80723 227 aaKnown RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 NFKB2Q00653 900 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 KCNJ11Q14654 390 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 BORAQ6PGQ7 559 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 TIPARPQ7Z3E1 657 aaKnown RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 CFAP206Q8IYR0 622 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 CLDN19Q8N6F1 224 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 SPDYE1Q8NFV5 336 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 ZFPM2Q8WW38 1151 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 SLC45A3Q96JT2 553 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 RMDN2Q96LZ7 410 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 NAP1L3Q99457 506 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 AP1M1Q9BXS5 423 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 GPN2Q9H9Y4 310 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 CHRAC1Q9NRG0 131 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 TREX1Q9NSU2 369 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 TMEM184BQ9Y519 407 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-221ENST00000584888 SPTA1P02549 2419 aa17.41■□□□□ 0.38
ERBB2-221ENST00000584888 LOC101059948A0A1B0GTJ6 334 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 AP3B1O00203 1094 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 PGRMC1O00264 195 aaKnown RBP17.4■□□□□ 0.38
ERBB2-221ENST00000584888 CAPN5O15484 640 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-221ENST00000584888 KIF5CO60282 957 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 KRT14P02533 472 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 GSTM1P09488 218 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 AMD1P17707 334 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 NSG1P42857 185 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 SESN2P58004 480 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-221ENST00000584888 GSTM4Q03013 218 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 LRRC8BQ6P9F7 803 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 AFTPHQ6ULP2 937 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 UNC5BQ8IZJ1 945 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 OR4L1Q8NH43 312 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 RSC1A1Q92681 617 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 KIAA1143Q96AT1 154 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-221ENST00000584888 TGM7Q96PF1 710 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 IL22Q9GZX6 179 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 OR52A5Q9H2C5 316 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 COG4Q9H9E3 785 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 SIDT1Q9NXL6 827 aaKnown RBP17.4■□□□□ 0.38
ERBB2-221ENST00000584888 SEMA5BQ9P283 1151 aa17.4■□□□□ 0.38
ERBB2-221ENST00000584888 CFAP20Q9Y6A4 193 aaKnown RBP17.4■□□□□ 0.38
ERBB2-221ENST00000584888 ZNF891A8MT65 544 aaPredicted RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 ZNF185O15231 689 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 TOX3O15405 576 aaPredicted RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 NKX2-8O15522 239 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 POLBP06746 335 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 CAPZBP47756 277 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 LEPRP48357 1165 aaKnown RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 CRADDP78560 199 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 KCNC4Q03721 635 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 ABHD18Q0P651 414 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 RPA4Q13156 261 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 SEMA3AQ14563 771 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 TRIP13Q15645 432 aaPredicted RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 LYPLAL1Q5VWZ2 237 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 CERS6Q6ZMG9 384 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 PPHLN1Q8NEY8 458 aaKnown RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 ANP32BQ92688 251 aaKnown RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 C12orf66Q96MD2 445 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 KIFC1Q9BW19 673 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 SLC25A18Q9H1K4 315 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 ADNPQ9H2P0 1102 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 TRIT1Q9H3H1 467 aaKnown RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 MRM3Q9HC36 420 aaKnown RBP17.39■□□□□ 0.37
ERBB2-221ENST00000584888 BFARQ9NZS9 450 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 PYCARDQ9ULZ3 195 aa17.39■□□□□ 0.37
ERBB2-221ENST00000584888 TLN1Q9Y490 2541 aaKnown RBP17.38■□□□□ 0.37
ERBB2-221ENST00000584888 SUV39H1O43463 412 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 WISP1O95388 367 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 DLGAP3O95886 979 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 SLC35G4P0C7Q5 338 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 PDHA2P29803 388 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 CD151P48509 253 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 SEPHS1P49903 392 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 FOXM1Q08050 763 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 GPS1Q13098 491 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 ANKRD22Q5VYY1 191 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 ARMC3Q5W041 872 aa17.38■□□□□ 0.37
ERBB2-221ENST00000584888 DUS1LQ6P1R4 473 aaKnown RBP17.38■□□□□ 0.37
ERBB2-221ENST00000584888 CCDC137Q6PK04 289 aaKnown RBP17.38■□□□□ 0.37
ERBB2-221ENST00000584888 ATG14Q6ZNE5 492 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms