RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OARD1Q9Y530 152 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 STON1Q9Y6Q2 735 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 CCDC163A0A0D9SF12 145 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 AGAP14A8MT82 685 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CHURC1-FNTBB4DL54 471 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ZNF195O14628 629 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 FFAR2O15552 330 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CCNT2O60583 730 aaKnown RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 LILRB5O75023 590 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 SIX3O95343 332 aaPredicted RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 OTCP00480 354 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 EGFP01133 1207 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 FGF4P08620 206 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ENO2P09104 434 aaPredicted RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 MPC1LP0DKB6 136 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 UROSP10746 265 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 COX4I1P13073 169 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 HMOX2P30519 316 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TIE1P35590 1138 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 IL12RB1P42701 662 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 WASP42768 502 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CPA2P48052 419 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 PKNOX1P55347 436 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 SEC13P55735 322 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 KCNJ2P63252 427 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 MRPS21P82921 87 aaKnown RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 BTKQ06187 659 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TMEM115Q12893 351 aaPredicted RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 CDC16Q13042 620 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 KLF10Q13118 480 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ART3Q13508 389 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CYLC2Q14093 348 aaPredicted RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 SNCBQ16143 134 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 SPRED3Q2MJR0 410 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 MMEL1Q495T6 779 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TMEM52BQ4KMG9 183 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ACSBG2Q5FVE4 666 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 RAET1GQ6H3X3 334 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TTC23LQ6PF05 361 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TSSK4Q6SA08 328 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 Q6ZS52 159 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 RFLNAQ6ZTI6 216 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 GPRIN3Q6ZVF9 776 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 UBE2R2Q712K3 238 aaPredicted RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 RPS27LQ71UM5 84 aaKnown RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 CEP68Q76N32 757 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ASRGL1Q7L266 308 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ZNF765Q7L2R6 523 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 SYT13Q7L8C5 426 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CYP2U1Q7Z449 544 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TECPR1Q7Z6L1 1165 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 RPLP0P6Q8NHW5 317 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 KCNV2Q8TDN2 545 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ACTRT2Q8TDY3 377 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 NELL1Q92832 810 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ARRDC3Q96B67 414 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CHFRQ96EP1 664 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 PTCD3Q96EY7 689 aaKnown RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 CATSPER2Q96P56 530 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 VPS35Q96QK1 796 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CCT7Q99832 543 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CCM2Q9BSQ5 444 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TBC1D10AQ9BXI6 508 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 HDAC8Q9BY41 377 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 TMEM245Q9H330 911 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 PRSS16Q9NQE7 514 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 RIC8BQ9NVN3 520 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 ARL15Q9NXU5 204 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 CACNA2D2Q9NY47 1150 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 NFKBIL1Q9UBC1 381 aaPredicted RBP9.12□□□□□ -0.95
SS18-220ENST00000582092 OPTCQ9UBM4 332 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 SARDHQ9UL12 918 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 NCKAP1Q9Y2A7 1128 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 MED16Q9Y2X0 877 aa9.12□□□□□ -0.95
SS18-220ENST00000582092 IGLV3-16A0A075B6K0 115 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 LOC100653049A0A140TA62 436 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 OR2AG2A6NM03 316 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 TMEM233B4DJY2 109 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 INPP4BO15327 924 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 SLC16A5O15375 505 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 TSPAN6O43657 245 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 KLK8O60259 260 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 MMP20O60882 483 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 KATNA1O75449 491 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 KRT34O76011 436 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 TM7SF2O76062 418 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 RECQL5O94762 991 aaPredicted RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 CDK14O94921 469 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 DNTTP04053 509 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 T-ENOLP0DO92 83 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 MTHFD2P13995 350 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 EPB42P16452 691 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 C5AR1P21730 350 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 AOAHP28039 575 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 ARRB2P32121 409 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 RPIAP49247 311 aa9.11□□□□□ -0.95
SS18-220ENST00000582092 IRX1P78414 480 aaPredicted RBP9.11□□□□□ -0.95
SS18-220ENST00000582092 PLOD1Q02809 727 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms