RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ACADVLP49748 655 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 SERPINB9P50453 376 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 LIMK2P53671 638 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 EFTUD2Q15029 972 aaKnown RBP eCLIP11.91□□□□□ -0.59e-11■■■■■ 28.8
CCDC84-209ENST00000580556 SHBQ15464 509 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 ZNF658BQ4V348 819 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-209ENST00000580556 PTRHD1Q6GMV3 140 aaKnown RBP11.91□□□□□ -0.5
CCDC84-209ENST00000580556 ZNF549Q6P9A3 640 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 DET1Q7L5Y6 550 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 TAOK1Q7L7X3 1001 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 AMZ2Q86W34 360 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 TDRPQ86YL5 185 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 OR2L2Q8NH16 312 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 HM13Q8TCT9 377 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 GPBAR1Q8TDU6 330 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 FGF11Q92914 225 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 VPS39Q96JC1 886 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 CNDP2Q96KP4 475 aaKnown RBP11.91□□□□□ -0.5
CCDC84-209ENST00000580556 PAFAH2Q99487 392 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 GPR22Q99680 433 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 CCM2Q9BSQ5 444 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 AARSD1Q9BTE6 412 aaKnown RBP11.91□□□□□ -0.5
CCDC84-209ENST00000580556 LRRC61Q9BV99 259 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 NRSN2Q9GZP1 204 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 CPNE5Q9HCH3 593 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 LATS2Q9NRM7 1088 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 SPASTQ9UBP0 616 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 ZNHIT2Q9UHR6 403 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 PCDHGA1Q9Y5H4 931 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 PCYT1BQ9Y5K3 369 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-209ENST00000580556 IKBKGQ9Y6K9 419 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 CSNK1G3Q9Y6M4 447 aa11.91□□□□□ -0.5
CCDC84-209ENST00000580556 ERVH48-1M5A8F1 160 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 LIN7AO14910 233 aaPredicted RBP11.9□□□□□ -0.5
CCDC84-209ENST00000580556 POP7O75817 140 aaKnown RBP11.9□□□□□ -0.5
CCDC84-209ENST00000580556 PIAS1O75925 651 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 LDOC1O95751 146 aaPredicted RBP11.9□□□□□ -0.5
CCDC84-209ENST00000580556 EPHA8P29322 1005 aaPredicted RBP11.9□□□□□ -0.5
CCDC84-209ENST00000580556 FMO4P31512 558 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 MSH2P43246 934 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 PLOD1Q02809 727 aaPredicted RBP11.9□□□□□ -0.5
CCDC84-209ENST00000580556 KCNC4Q03721 635 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 ILF3Q12906 894 aaKnown RBP eCLIP11.9□□□□□ -0.55e-7■□□□□ 10.7
CCDC84-209ENST00000580556 RPA4Q13156 261 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 ELOCQ15369 112 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 FAM45BPQ6NSW5 357 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 CRTC3Q6UUV7 619 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 EID2Q8N6I1 236 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 ZNF548Q8NEK5 533 aaPredicted RBP11.9□□□□□ -0.5
CCDC84-209ENST00000580556 FAM45AQ8TCE6 357 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 GSDMCQ9BYG8 508 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 TMEM168Q9H0V1 697 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 POPDC3Q9HBV1 291 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 SPATS2LQ9NUQ6 558 aaKnown RBP11.9□□□□□ -0.5
CCDC84-209ENST00000580556 GULP1Q9UBP9 304 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 MOSPD1Q9UJG1 213 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 MED16Q9Y2X0 877 aa11.9□□□□□ -0.5
CCDC84-209ENST00000580556 FAM95CA0A1B0GW59 222 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 E5RI56 91 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 LMO7DNF2Z398 122 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 EIF3FO00303 357 aaPredicted RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 AQP9O43315 295 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 VPS26AO75436 327 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 KRT38O76015 456 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 SHBGP04278 402 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 ITGA2BP08514 1039 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 CTSEP14091 401 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 FDXRP22570 491 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 AOAHP28039 575 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 GCAP28676 217 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 ATP5DP30049 168 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 SKIV2L2P42285 1042 aaKnown RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 CLCN7P51798 805 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 CTBSQ01459 385 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 POU4F1Q01851 419 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 INSCQ1MX18 579 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 PRRT3Q5FWE3 981 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 ARHGAP40Q5TG30 622 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 AGAP9Q5VTM2 703 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 METRNLQ641Q3 311 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 LVRNQ6Q4G3 990 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 ADGRD1Q6QNK2 874 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 KANSL1Q7Z3B3 1105 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 RD3Q7Z3Z2 195 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 CCDC91Q7Z6B0 441 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 BEND7Q8N7W2 519 aaPredicted RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 UHMK1Q8TAS1 419 aaKnown RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 DCAKDQ8WVC6 231 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 ASZ1Q8WWH4 475 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 ISL2Q96A47 359 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 TMEM109Q9BVC6 243 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 TCEAL2Q9H3H9 227 aaPredicted RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 TAS2R13Q9NYV9 303 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 PSMC3IPQ9P2W1 217 aaPredicted RBP11.89□□□□□ -0.51
CCDC84-209ENST00000580556 SLC23A2Q9UGH3 650 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 ACSL5Q9ULC5 683 aa11.89□□□□□ -0.51
CCDC84-209ENST00000580556 VWA7Q9Y334 891 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms